RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 C7orf34Q96L11 122 aa6.56□□□□□ -1.36
PTCSC3-201ENST00000556013 ZNF582Q96NG8 517 aaPredicted RBP6.56□□□□□ -1.36
PTCSC3-201ENST00000556013 SIGLEC11Q96RL6 698 aa6.56□□□□□ -1.36
PTCSC3-201ENST00000556013 KCTD14Q9BQ13 255 aaPredicted RBP6.56□□□□□ -1.36
PTCSC3-201ENST00000556013 HDHD2Q9H0R4 259 aa6.56□□□□□ -1.36
PTCSC3-201ENST00000556013 SYT4Q9H2B2 425 aa6.56□□□□□ -1.36
PTCSC3-201ENST00000556013 MED4Q9NPJ6 270 aa6.56□□□□□ -1.36
PTCSC3-201ENST00000556013 UBAP1Q9NZ09 502 aa6.56□□□□□ -1.36
PTCSC3-201ENST00000556013 NDUFAF4Q9P032 175 aa6.56□□□□□ -1.36
PTCSC3-201ENST00000556013 MIOXQ9UGB7 285 aa6.56□□□□□ -1.36
PTCSC3-201ENST00000556013 EGFL7Q9UHF1 273 aa6.56□□□□□ -1.36
PTCSC3-201ENST00000556013 NUP50Q9UKX7 468 aa6.56□□□□□ -1.36
PTCSC3-201ENST00000556013 AURKCQ9UQB9 309 aa6.56□□□□□ -1.36
PTCSC3-201ENST00000556013 LRCH1Q9Y2L9 728 aa6.56□□□□□ -1.36
PTCSC3-201ENST00000556013 COA3Q9Y2R0 106 aaPredicted RBP6.56□□□□□ -1.36
PTCSC3-201ENST00000556013 ADAM18Q9Y3Q7 739 aa6.56□□□□□ -1.36
PTCSC3-201ENST00000556013 AUP1Q9Y679 476 aa6.56□□□□□ -1.36
PTCSC3-201ENST00000556013 DYSFO75923 2080 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 ISPDA4D126 451 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 POM121CA8CG34 1229 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 IQCF6A8MYZ5 107 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 TRAPPC2LH3BP13 241 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 HKR1P10072 659 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 PRTN3P24158 256 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 ZFP36P26651 326 aaKnown RBP6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 IFNGR2P38484 337 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 CDKN2AP42771 156 aaKnown RBP6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 GATA4P43694 442 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 GPR4P46093 362 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 HMGA2P52926 109 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 PSME3P61289 254 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 UBA52P62987 128 aaKnown RBP6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 COX10Q12887 443 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 KRT72Q14CN4 511 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 C11orf91Q3C1V1 193 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 KRTAP27-1Q3LI81 207 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 SPATS1Q496A3 300 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 ESCO2Q56NI9 601 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 SMARCD3Q6STE5 483 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 LRRN1Q6UXK5 716 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 C9orf139Q6ZV77 190 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 ZBTB46Q86UZ6 589 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 C1orf87Q8N0U7 546 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 POU5F2Q8N7G0 328 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 ATG16L2Q8NAA4 619 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 PLPP7Q8NBV4 271 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 ITLN1Q8WWA0 313 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 PYURFQ96I23 114 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 FAM46AQ96IP4 442 aaKnown RBP6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 PLEKHA8Q96JA3 519 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 OR2V2Q96R30 315 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 SLC30A2Q9BRI3 323 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 FUZQ9BT04 418 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 MRI1Q9BV20 369 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 ZNF747Q9BV97 191 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 C1QTNF5Q9BXJ0 243 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 PLA2G12AQ9BZM1 189 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 SLC22A4Q9H015 551 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 NUAK2Q9H093 628 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 MYLK2Q9H1R3 596 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 TMEM165Q9HC07 324 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 GCM1Q9NP62 436 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 EMC7Q9NPA0 242 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 SPAG4Q9NPE6 437 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 MMP26Q9NRE1 261 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 TMEM100Q9NV29 134 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 ARMCX1Q9P291 453 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 ASH2LQ9UBL3 628 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 KCNG2Q9UJ96 466 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 B9D1Q9UPM9 204 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 NOP16Q9Y3C1 178 aaKnown RBP6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 IER3IP1Q9Y5U9 82 aa6.55□□□□□ -1.36
PTCSC3-201ENST00000556013 ARHGAP32A7KAX9 2087 aa6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 KIR2DS1A0A191URI9 304 aa6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 UNC119BA6NIH7 251 aa6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 LRRC30A6NM36 301 aa6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 H7C1C5 153 aa6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 RER1O15258 196 aa6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 ATP8B1O43520 1251 aa6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 SPRY1O43609 319 aaPredicted RBP6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 KRT36O76013 467 aa6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 PPP1R3DO95685 299 aa6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 RENP00797 406 aa6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 LIPFP07098 398 aa6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 HSD17B1P14061 328 aa6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 EGR1P18146 543 aa6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 SLC6A6P31641 620 aa6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 MTNR1AP48039 350 aa6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 NPY4RP50391 375 aa6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 FXYD6P3P58550 94 aa6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 LCN6P62502 163 aa6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 LCN2P80188 198 aa6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 PAX2Q02962 417 aa6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 ZMYND11Q15326 602 aa6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 RSPO1Q2MKA7 263 aaPredicted RBP6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 AWAT1Q58HT5 328 aa6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 SPRNQ5BIV9 151 aa6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 C1orf94Q6P1W5 598 aa6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 BTNL3Q6UXE8 466 aa6.54□□□□□ -1.36
PTCSC3-201ENST00000556013 PTCHD4Q6ZW05 846 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms