RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 CFAP53Q96M91 514 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 OR5B12Q96R08 314 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 NOX3Q9HBY0 568 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 FAM49BQ9NUQ9 324 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 MTCH1Q9NZJ7 389 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 TBX21Q9UL17 535 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 KCNE3Q9Y6H6 103 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 TNS3Q68CZ2 1445 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 ADGRB1O14514 1584 aa3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 CDC42BPGQ6DT37 1551 aa3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 ATP7BP35670 1465 aa3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 ANKRD36BQ8N2N9 1353 aa3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 IGHV3-74A0A0B4J1X5 117 aa3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 ANGPTL7O43827 346 aa3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 CACNG3O60359 315 aa3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 FGFR1OPO95684 399 aaKnown RBP3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 ERCC1P07992 297 aaPredicted RBP3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 MAS1LP35410 378 aa3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 GPX4P36969 197 aaPredicted RBP3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 CSNK1EP49674 416 aaKnown RBP3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 RAB9AP51151 201 aa3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 EIF3EP60228 445 aaKnown RBP3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 STXBP1P61764 594 aaKnown RBP3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 LRRC63Q05C16 580 aa3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 IL18Q14116 193 aa3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 HSDL1Q3SXM5 330 aa3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 CMC1Q7Z7K0 106 aa3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 GABRG1Q8N1C3 465 aa3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 OR10J6PQ8NGY7 276 aa3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 CAPSLQ8WWF8 208 aa3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 STARD8Q92502 1023 aa3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 NRGNQ92686 78 aa3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 FAM104AQ969W3 186 aa3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 C8orf44Q96CB5 159 aa3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 SEH1LQ96EE3 360 aa3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 SLC25A2Q9BXI2 301 aa3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 SLC40A1Q9NP59 571 aa3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 C20orf96Q9NUD7 363 aaPredicted RBP3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 SLC17A4Q9Y2C5 497 aa3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 ASXL1Q8IXJ9 1541 aa3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 TULP4Q9NRJ4 1543 aa3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 EDC4Q6P2E9 1401 aaKnown RBP3.43□□□□□ -1.86
CKS1BP1-201ENST00000555221 CACNA1AO00555 2505 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 XRN1Q8IZH2 1706 aaKnown RBP3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 CPDO75976 1380 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 AHDC1Q5TGY3 1603 aaPredicted RBP3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 CASQ2O14958 399 aaPredicted RBP3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 NUPL2O15504 423 aaKnown RBP3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 SNAI2O43623 268 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 EIF4E2O60573 245 aaKnown RBP3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 FKBP6O75344 327 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 GABARAPO95166 117 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 HLA-DPB1P04440 258 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 PRPS2P11908 318 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 WARSP23381 471 aaKnown RBP3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 STOMP27105 288 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 HMOX2P30519 316 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 CEACAM6P40199 344 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 NAMPTP43490 491 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 UQCRFS1P47985 274 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 PPOXP50336 477 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 GBE1Q04446 702 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 ERCC8Q13216 396 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 MAB21L1Q13394 359 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 MADCAM1Q13477 382 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 UBE2SQ16763 222 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 PTPN20Q4JDL3 420 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 XKR4Q5GH76 650 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 TWF2Q6IBS0 349 aaKnown RBP3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 OR52W1Q6IF63 320 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 DUX4L9Q6RFH8 374 aaPredicted RBP3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 FAM92BQ6ZTR7 304 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 SAXO1Q8IYX7 474 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 LYPD6BQ8NI32 183 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 FOPNLQ96NB1 174 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 XPO6Q96QU8 1125 aaKnown RBP3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 LZTS2Q9BRK4 669 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 NEUROG2Q9H2A3 272 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 AUNIPQ9H7T9 357 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 MYOZ2Q9NPC6 264 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 UVRAGQ9P2Y5 699 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 PSG8Q9UQ74 426 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 ST3GAL6Q9Y274 331 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 CAB39Q9Y376 341 aaPredicted RBP3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 MYO5BQ9ULV0 1848 aa3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 MN1Q10571 1320 aaPredicted RBP3.42□□□□□ -1.86
CKS1BP1-201ENST00000555221 NRXN3Q9Y4C0 1643 aa3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 IGKV6D-21A0A0A0MT36 114 aa3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 IGHV5-51A0A0C4DH38 117 aa3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 SERTM2A0A1B0GWG4 89 aa3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 H7C0C1 242 aa3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 SCAMP2O15127 329 aaKnown RBP3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 CLDN11O75508 207 aa3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 SLC25A14O95258 325 aaPredicted RBP3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 SERPINE2P07093 398 aa3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 FGF4P08620 206 aa3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 SFTPCP11686 197 aa3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 ANXA8P13928 327 aa3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 BCKDHBP21953 392 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms