RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 KITLGP21583 273 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 COL8A2P25067 703 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 CRYBB2P43320 205 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 MAGEB1P43366 347 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 ZNF81P51508 661 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 TMEM33P57088 247 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 CCL8P80075 99 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 TEKQ02763 1124 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 MEP1BQ16820 701 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 ALKBH6Q3KRA9 238 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 KRTAP27-1Q3LI81 207 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 SLC36A3Q495N2 470 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 ZMAT1Q5H9K5 638 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 CLEC12AQ5QGZ9 265 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 ZNF362Q5T0B9 420 aaPredicted RBP6.41□□□□□ -1.38
LINC00640-201ENST00000554409 SPATA46Q5T0L3 261 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 FAM166AQ6J272 317 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 SLC18B1Q6NT16 456 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 PRIMA1Q86XR5 153 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 AQP11Q8NBQ7 271 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 SDR9C7Q8NEX9 313 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 OR10G2Q8NGC3 310 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 OR52E2Q8NGJ4 325 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 OR8D4Q8NGM9 314 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 OR1F12Q8NHA8 337 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 CANT1Q8WVQ1 401 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 GTF3AQ92664 365 aaKnown RBP6.41□□□□□ -1.38
LINC00640-201ENST00000554409 YIPF5Q969M3 257 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 MSI2Q96DH6 328 aaKnown RBP6.41□□□□□ -1.38
LINC00640-201ENST00000554409 CHID1Q9BWS9 393 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 SRA1Q9HD15 236 aaKnown RBP6.41□□□□□ -1.38
LINC00640-201ENST00000554409 ZNF275Q9NSD4 429 aaPredicted RBP6.41□□□□□ -1.38
LINC00640-201ENST00000554409 TBC1D23Q9NUY8 699 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 LPAR3Q9UBY5 353 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 CYB5R1Q9UHQ9 305 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 KCNG2Q9UJ96 466 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 ZDHHC8Q9ULC8 765 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 POLR1DQ9Y2S0 133 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 U3KQV3 271 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 ZFHX3Q15911 3703 aa6.41□□□□□ -1.38
LINC00640-201ENST00000554409 ABCA2Q9BZC7 2435 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 RTTNQ86VV8 2226 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 IGHV1-69-2A0A0G2JMI3 117 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 LOC100289279A0A1B0GTE1 492 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 TCRBV3S1A0A5B6 114 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 PLSCR5A0PG75 271 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 LRP5LA4QPB2 252 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 ZSCAN5BA6NJL1 495 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 LMX1BO60663 402 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 DNAJC8O75937 253 aaPredicted RBP6.4□□□□□ -1.38
LINC00640-201ENST00000554409 RAC2P15153 192 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 IL2RGP31785 369 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 GGT2P36268 569 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 GPR6P46095 362 aaPredicted RBP6.4□□□□□ -1.38
LINC00640-201ENST00000554409 CENPAP49450 140 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 PPP1R8Q12972 351 aaKnown RBP6.4□□□□□ -1.38
LINC00640-201ENST00000554409 BNIP1Q12981 228 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 ECH1Q13011 328 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 PSG7Q13046 419 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 FLOT2Q14254 428 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 TRIP10Q15642 601 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 CHRFAM7AQ494W8 412 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 SLC35F1Q5T1Q4 408 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 OTPQ5XKR4 325 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 FBXW12Q6X9E4 464 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 COLCA1Q6ZS62 124 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 SLC37A3Q8NCC5 494 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 PAPD5Q8NDF8 572 aaKnown RBP6.4□□□□□ -1.38
LINC00640-201ENST00000554409 OR2T33Q8NG76 320 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 OR2AJ1Q8NGZ0 328 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 OR2T4Q8NH00 348 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 GIPC3Q8TF64 312 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 EDARADDQ8WWZ3 215 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 SLC7A6Q92536 515 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 APOBEC3DQ96AK3 386 aaPredicted RBP6.4□□□□□ -1.38
LINC00640-201ENST00000554409 HAVCR1Q96D42 359 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 FEVQ99581 238 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 NIPSNAP1Q9BPW8 284 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 SOX7Q9BT81 388 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 RBM4Q9BWF3 364 aaKnown RBP6.4□□□□□ -1.38
LINC00640-201ENST00000554409 TSSK6Q9BXA6 273 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 NMNAT2Q9BZQ4 307 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 FN3KQ9H479 309 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 POFUT1Q9H488 388 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 YY1AP1Q9H869 796 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 SAP30LQ9HAJ7 183 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 DECR2Q9NUI1 292 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 ARMC1Q9NVT9 282 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 MRPL22Q9NWU5 206 aaKnown RBP6.4□□□□□ -1.38
LINC00640-201ENST00000554409 PURGQ9UJV8 347 aaKnown RBP6.4□□□□□ -1.38
LINC00640-201ENST00000554409 CDC42EP3Q9UKI2 254 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 KCNS2Q9ULS6 477 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 POMPQ9Y244 141 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 STARD10Q9Y365 291 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 GRIP1Q9Y3R0 1128 aa6.4□□□□□ -1.38
LINC00640-201ENST00000554409 NIPBLQ6KC79 2804 aaeCLIP6.4□□□□□ -1.39
LINC00640-201ENST00000554409 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.39□□□□□ -1.39
LINC00640-201ENST00000554409 GNGT2O14610 69 aa6.39□□□□□ -1.39
LINC00640-201ENST00000554409 GSC2O15499 205 aa6.39□□□□□ -1.39
LINC00640-201ENST00000554409 TIMM8AO60220 97 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms