RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 IGFBP4P22692 258 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 PAX6P26367 422 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 PCP4P48539 62 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 PNLIPRP2P54317 469 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 OR1D5P58170 312 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 SSBP1Q04837 148 aaKnown RBP11□□□□□ -0.65
SHMT2-207ENST00000553837 INPP5JQ15735 1006 aaPredicted RBP11□□□□□ -0.65
SHMT2-207ENST00000553837 ELOA3BQ3SY89 546 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 BEX5Q5H9J7 111 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 WBP2NLQ6ICG8 309 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 LEG1Q6P5S2 330 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 NAA40Q86UY6 237 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 ELOA3Q8NG57 546 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 PAQR8Q8TEZ7 354 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 RNF141Q8WVD5 230 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 RGP1Q92546 391 aaPredicted RBP11□□□□□ -0.65
SHMT2-207ENST00000553837 KTI12Q96EK9 354 aaPredicted RBP11□□□□□ -0.65
SHMT2-207ENST00000553837 LRFN5Q96NI6 719 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 GPX7Q96SL4 187 aaPredicted RBP11□□□□□ -0.65
SHMT2-207ENST00000553837 ADOQ96SZ5 270 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 NEU1Q99519 415 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 SSX3Q99909 188 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 WDR77Q9BQA1 342 aaPredicted RBP11□□□□□ -0.65
SHMT2-207ENST00000553837 SLC25A21Q9BQT8 299 aaPredicted RBP11□□□□□ -0.65
SHMT2-207ENST00000553837 MYOZ1Q9NP98 299 aaPredicted RBP11□□□□□ -0.65
SHMT2-207ENST00000553837 UBQLN4Q9NRR5 601 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 CUTCQ9NTM9 273 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 TMEM100Q9NV29 134 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 UQCC1Q9NVA1 299 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 IGKV3D-11A0A0A0MRZ8 115 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 GGT3PA6NGU5 568 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 MBTPS2O43462 519 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 F12P00748 615 aaPredicted RBP11□□□□□ -0.65
SHMT2-207ENST00000553837 IGKV3-11P04433 115 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 F13BP05160 661 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 RAB4AP20338 218 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 GALNSP34059 522 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 CASRP41180 1078 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 PPICP45877 212 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 FOXL2P58012 376 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 BPIFB3P59826 476 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 TOMM34Q15785 309 aaPredicted RBP11□□□□□ -0.65
SHMT2-207ENST00000553837 NKAPLQ5M9Q1 402 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 ACER2Q5QJU3 275 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 ZNF684Q5T5D7 378 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 STEAP1BQ6NZ63 245 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 IL34Q6ZMJ4 242 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 NDUFAF7Q7L592 441 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 RPS4Y2Q8TD47 263 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 ZNF721Q8TF20 911 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 TCTEX1D2Q8WW35 142 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 ADIPOR1Q96A54 375 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 NUDT9Q9BW91 350 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 CHMP1AQ9HD42 196 aaPredicted RBP11□□□□□ -0.65
SHMT2-207ENST00000553837 MMP25Q9NPA2 562 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 SLC2A4RGQ9NR83 387 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 MMP26Q9NRE1 261 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 SMCO4Q9NRQ5 59 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 ASH2LQ9UBL3 628 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 COLQQ9Y215 455 aaPredicted RBP11□□□□□ -0.65
SHMT2-207ENST00000553837 HIF3AQ9Y2N7 669 aa11□□□□□ -0.65
SHMT2-207ENST00000553837 TMEM150CB9EJG8 249 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 H7C1C5 153 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 ICOSLGO75144 302 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 ZNF217O75362 1048 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 GLCEO94923 617 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 CD3DP04234 171 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 ASAH2BP0C7U1 165 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 MUC1P15941 1255 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-207ENST00000553837 NFYBP25208 207 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 PRSS3P35030 304 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 LCN6P62502 163 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 SRSF3P84103 164 aaKnown RBP10.99□□□□□ -0.65
SHMT2-207ENST00000553837 ANKRD16Q6P6B7 361 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 OGFOD3Q6PK18 319 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 ZNF227Q86WZ6 799 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 C10orf53Q8N6V4 93 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 C15orf54Q8N8G6 183 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 STOML3Q8TAV4 291 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 ELF4Q99607 663 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-207ENST00000553837 LPAR4Q99677 370 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 ALG12Q9BV10 488 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 EGLN1Q9GZT9 426 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 CDV3Q9UKY7 258 aaKnown RBP10.99□□□□□ -0.65
SHMT2-207ENST00000553837 ALPK2Q86TB3 2170 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 PCNX3Q9H6A9 2034 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 LMO7DNF2Z398 122 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 ZNF264O43296 627 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 ZFPL1O95159 310 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 TPT1P13693 172 aaKnown RBP10.99□□□□□ -0.65
SHMT2-207ENST00000553837 CBR1P16152 277 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 ABCD3P28288 659 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 CD34P28906 385 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 CTXN1P60606 82 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 PRPS1P60891 318 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 ALKBH1Q13686 389 aaKnown RBP10.99□□□□□ -0.65
SHMT2-207ENST00000553837 ISXQ2M1V0 245 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 Q499Y3 187 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 C14orf28Q4W4Y0 310 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 SLC35D3Q5M8T2 416 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms