RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 BPESC1Q9GZL8 116 aa17.39■□□□□ 0.37
FOXA1-203ENST00000553751 ZNF556Q9HAH1 456 aa17.39■□□□□ 0.37
FOXA1-203ENST00000553751 PNRC2Q9NPJ4 139 aaKnown RBP17.39■□□□□ 0.37
FOXA1-203ENST00000553751 COMMD3-BMI1R4GMX3 469 aa17.39■□□□□ 0.37
FOXA1-203ENST00000553751 CLUP10909 449 aa17.38■□□□□ 0.37
FOXA1-203ENST00000553751 ZNF3P17036 446 aa17.38■□□□□ 0.37
FOXA1-203ENST00000553751 POU1F1P28069 291 aa17.38■□□□□ 0.37
FOXA1-203ENST00000553751 RPS27P42677 84 aaKnown RBP17.38■□□□□ 0.37
FOXA1-203ENST00000553751 RIN1Q13671 783 aa17.38■□□□□ 0.37
FOXA1-203ENST00000553751 GGTLC2Q14390 218 aa17.38■□□□□ 0.37
FOXA1-203ENST00000553751 RSPO1Q2MKA7 263 aaPredicted RBP17.38■□□□□ 0.37
FOXA1-203ENST00000553751 TMEM249Q2WGJ8 235 aa17.38■□□□□ 0.37
FOXA1-203ENST00000553751 SLC27A4Q6P1M0 643 aa17.38■□□□□ 0.37
FOXA1-203ENST00000553751 TMEM154Q6P9G4 183 aa17.38■□□□□ 0.37
FOXA1-203ENST00000553751 ATG16L2Q8NAA4 619 aa17.38■□□□□ 0.37
FOXA1-203ENST00000553751 OR2AJ1Q8NGZ0 328 aa17.38■□□□□ 0.37
FOXA1-203ENST00000553751 MAP6Q96JE9 813 aa17.38■□□□□ 0.37
FOXA1-203ENST00000553751 CDADC1Q9BWV3 514 aa17.38■□□□□ 0.37
FOXA1-203ENST00000553751 HCAR1Q9BXC0 346 aa17.38■□□□□ 0.37
FOXA1-203ENST00000553751 STARD10Q9Y365 291 aa17.38■□□□□ 0.37
FOXA1-203ENST00000553751 IGHV4-61A0A0C4DH41 118 aa17.37■□□□□ 0.37
FOXA1-203ENST00000553751 J3QW42 95 aa17.37■□□□□ 0.37
FOXA1-203ENST00000553751 CD5LO43866 347 aa17.37■□□□□ 0.37
FOXA1-203ENST00000553751 MT-ND5P03915 603 aa17.37■□□□□ 0.37
FOXA1-203ENST00000553751 ZNF823P16415 610 aa17.37■□□□□ 0.37
FOXA1-203ENST00000553751 HOXB4P17483 251 aaPredicted RBP17.37■□□□□ 0.37
FOXA1-203ENST00000553751 TUBG1P23258 451 aa17.37■□□□□ 0.37
FOXA1-203ENST00000553751 RGS6P49758 472 aa17.37■□□□□ 0.37
FOXA1-203ENST00000553751 GINS1Q14691 196 aa17.37■□□□□ 0.37
FOXA1-203ENST00000553751 PCGF3Q3KNV8 242 aa17.37■□□□□ 0.37
FOXA1-203ENST00000553751 ACSM5Q6NUN0 579 aa17.37■□□□□ 0.37
FOXA1-203ENST00000553751 FAHD1Q6P587 224 aa17.37■□□□□ 0.37
FOXA1-203ENST00000553751 CCDC121Q6ZUS5 278 aa17.37■□□□□ 0.37
FOXA1-203ENST00000553751 ZNF540Q8NDQ6 660 aa17.37■□□□□ 0.37
FOXA1-203ENST00000553751 OR10S1Q8NGN2 331 aa17.37■□□□□ 0.37
FOXA1-203ENST00000553751 PITX2Q99697 317 aa17.37■□□□□ 0.37
FOXA1-203ENST00000553751 ATF6BQ99941 703 aa17.37■□□□□ 0.37
FOXA1-203ENST00000553751 WDR76Q9H967 626 aa17.37■□□□□ 0.37
FOXA1-203ENST00000553751 TUBG2Q9NRH3 451 aa17.37■□□□□ 0.37
FOXA1-203ENST00000553751 NKIRAS2Q9NYR9 191 aa17.37■□□□□ 0.37
FOXA1-203ENST00000553751 AP4S1Q9Y587 144 aa17.37■□□□□ 0.37
FOXA1-203ENST00000553751 ANK3Q12955 4377 aaKnown RBP17.37■□□□□ 0.37
FOXA1-203ENST00000553751 ZSCAN5BA6NJL1 495 aa17.36■□□□□ 0.37
FOXA1-203ENST00000553751 FAM183AA6NL82 134 aa17.36■□□□□ 0.37
FOXA1-203ENST00000553751 CIB2O75838 187 aa17.36■□□□□ 0.37
FOXA1-203ENST00000553751 ZNF81P51508 661 aa17.36■□□□□ 0.37
FOXA1-203ENST00000553751 CCL8P80075 99 aa17.36■□□□□ 0.37
FOXA1-203ENST00000553751 MRPS11P82912 194 aaKnown RBP17.36■□□□□ 0.37
FOXA1-203ENST00000553751 CDK5Q00535 292 aa17.36■□□□□ 0.37
FOXA1-203ENST00000553751 PSG7Q13046 419 aa17.36■□□□□ 0.37
FOXA1-203ENST00000553751 PCK2Q16822 640 aa17.36■□□□□ 0.37
FOXA1-203ENST00000553751 LINC01590Q5TEZ4 76 aa17.36■□□□□ 0.37
FOXA1-203ENST00000553751 ZNF511Q8NB15 262 aa17.36■□□□□ 0.37
FOXA1-203ENST00000553751 OR5K1Q8NHB7 308 aa17.36■□□□□ 0.37
FOXA1-203ENST00000553751 DNAJC9Q8WXX5 260 aa17.36■□□□□ 0.37
FOXA1-203ENST00000553751 RDH5Q92781 318 aa17.36■□□□□ 0.37
FOXA1-203ENST00000553751 COG8Q96MW5 612 aa17.36■□□□□ 0.37
FOXA1-203ENST00000553751 MED20Q9H944 212 aa17.36■□□□□ 0.37
FOXA1-203ENST00000553751 KIF17Q9P2E2 1029 aa17.36■□□□□ 0.37
FOXA1-203ENST00000553751 CGGBP1Q9UFW8 167 aaPredicted RBP17.36■□□□□ 0.37
FOXA1-203ENST00000553751 PLSCR5A0PG75 271 aa17.35■□□□□ 0.37
FOXA1-203ENST00000553751 INAFM1C9JVW0 142 aa17.35■□□□□ 0.37
FOXA1-203ENST00000553751 SURF4O15260 269 aa17.35■□□□□ 0.37
FOXA1-203ENST00000553751 IGHV1-46P01743 117 aa17.35■□□□□ 0.37
FOXA1-203ENST00000553751 ACHEP22303 614 aa17.35■□□□□ 0.37
FOXA1-203ENST00000553751 COL8A2P25067 703 aa17.35■□□□□ 0.37
FOXA1-203ENST00000553751 FASP25445 335 aa17.35■□□□□ 0.37
FOXA1-203ENST00000553751 FMO3P31513 532 aa17.35■□□□□ 0.37
FOXA1-203ENST00000553751 ENTPD1P49961 510 aa17.35■□□□□ 0.37
FOXA1-203ENST00000553751 DAPP51397 102 aa17.35■□□□□ 0.37
FOXA1-203ENST00000553751 ECH1Q13011 328 aa17.35■□□□□ 0.37
FOXA1-203ENST00000553751 OR6K6Q8NGW6 343 aa17.35■□□□□ 0.37
FOXA1-203ENST00000553751 PTP4A1Q93096 173 aa17.35■□□□□ 0.37
FOXA1-203ENST00000553751 YIPF5Q969M3 257 aa17.35■□□□□ 0.37
FOXA1-203ENST00000553751 APOBEC3DQ96AK3 386 aaPredicted RBP17.35■□□□□ 0.37
FOXA1-203ENST00000553751 POM121Q96HA1 1249 aa17.35■□□□□ 0.37
FOXA1-203ENST00000553751 CHODLQ9H9P2 273 aa17.35■□□□□ 0.37
FOXA1-203ENST00000553751 SLC25A19Q9HC21 320 aa17.35■□□□□ 0.37
FOXA1-203ENST00000553751 PAPOLBQ9NRJ5 636 aaKnown RBP17.35■□□□□ 0.37
FOXA1-203ENST00000553751 CYSLTR2Q9NS75 346 aa17.35■□□□□ 0.37
FOXA1-203ENST00000553751 YLPM1P49750 1951 aaKnown RBP17.35■□□□□ 0.37
FOXA1-203ENST00000553751 TIMM8AO60220 97 aaPredicted RBP17.34■□□□□ 0.37
FOXA1-203ENST00000553751 RP2O75695 350 aa17.34■□□□□ 0.37
FOXA1-203ENST00000553751 ADH4P08319 380 aa17.34■□□□□ 0.37
FOXA1-203ENST00000553751 SPARCP09486 303 aa17.34■□□□□ 0.37
FOXA1-203ENST00000553751 ACSM4P0C7M7 580 aa17.34■□□□□ 0.37
FOXA1-203ENST00000553751 IGHV4-31P0DP07 118 aa17.34■□□□□ 0.37
FOXA1-203ENST00000553751 KITLGP21583 273 aa17.34■□□□□ 0.37
FOXA1-203ENST00000553751 TEX30Q5JUR7 227 aa17.34■□□□□ 0.37
FOXA1-203ENST00000553751 COLCA1Q6ZS62 124 aa17.34■□□□□ 0.37
FOXA1-203ENST00000553751 PARP8Q8N3A8 854 aa17.34■□□□□ 0.37
FOXA1-203ENST00000553751 CMBLQ96DG6 245 aa17.34■□□□□ 0.37
FOXA1-203ENST00000553751 ZNF275Q9NSD4 429 aaPredicted RBP17.34■□□□□ 0.37
FOXA1-203ENST00000553751 DDX28Q9NUL7 540 aaKnown RBP17.34■□□□□ 0.37
FOXA1-203ENST00000553751 PURGQ9UJV8 347 aaKnown RBP17.34■□□□□ 0.37
FOXA1-203ENST00000553751 F5H5K5 113 aa17.33■□□□□ 0.36
FOXA1-203ENST00000553751 SPRY3O43610 288 aa17.33■□□□□ 0.36
FOXA1-203ENST00000553751 TACSTD2P09758 323 aa17.33■□□□□ 0.36
FOXA1-203ENST00000553751 FCGR1AP12314 374 aa17.33■□□□□ 0.36
FOXA1-203ENST00000553751 ZNF23P17027 643 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms