RNA–Protein interactions for RNA: ENST00000553746.1

ATL1-204, Transcript of atlastin GTPase 1, humanhuman

TSL 2

Gene ATL1, Length 370 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-204ENST00000553746 CCL21O00585 134 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 EIF1BO60739 113 aaKnown RBP0.7□□□□□ -2.3
ATL1-204ENST00000553746 RAMP3O60896 148 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 SURF6O75683 361 aaKnown RBP0.7□□□□□ -2.3
ATL1-204ENST00000553746 IDH1O75874 414 aaKnown RBP0.7□□□□□ -2.3
ATL1-204ENST00000553746 IGHV2-5P01817 119 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 LAP3P28838 519 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 ATP6V1E1P36543 226 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 EIF1P41567 113 aaKnown RBP0.7□□□□□ -2.3
ATL1-204ENST00000553746 GALR1P47211 349 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 RABIFP47224 123 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 PPT1P50897 306 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 ATP1B3P54709 279 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 VSX2P58304 361 aaPredicted RBP0.7□□□□□ -2.3
ATL1-204ENST00000553746 NUTF2P61970 127 aaKnown RBP0.7□□□□□ -2.3
ATL1-204ENST00000553746 CCNA1P78396 465 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 SELPLGQ14242 412 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 MPV17L2Q567V2 206 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 YIF1BQ5BJH7 314 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 RNASE13Q5GAN3 156 aaKnown RBP0.7□□□□□ -2.3
ATL1-204ENST00000553746 METTL13Q8N6R0 699 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 TRPV1Q8NER1 839 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 TTLQ8NG68 377 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 CCDC110Q8TBZ0 833 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 MGARPQ8TDB4 240 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 PTX4Q96A99 478 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 MS4A4EQ96PG1 132 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 RBM14Q96PK6 669 aaKnown RBP0.7□□□□□ -2.3
ATL1-204ENST00000553746 C1orf21Q9H246 121 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 HSD3B7Q9H2F3 369 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 RWDD1Q9H446 243 aaPredicted RBP0.7□□□□□ -2.3
ATL1-204ENST00000553746 ZSCAN16Q9H4T2 348 aaPredicted RBP0.7□□□□□ -2.3
ATL1-204ENST00000553746 C8orf17Q9NRJ1 99 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 UFSP2Q9NUQ7 469 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 SMOXQ9NWM0 555 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 NINJ2Q9NZG7 142 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 POLDIP2Q9Y2S7 368 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 HIVEP1P15822 2718 aa0.7□□□□□ -2.3
ATL1-204ENST00000553746 SLIT1O75093 1534 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 ABCA13Q86UQ4 5058 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 ADGRA3Q8IWK6 1321 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 CDHR2Q9BYE9 1310 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 SMG1Q96Q15 3661 aaKnown RBP0.69□□□□□ -2.3
ATL1-204ENST00000553746 IGHV1-3A0A0C4DH29 117 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 IGHV7-4-1A0A0J9YVY3 117 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 KRT87PA6NCN2 255 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 GOLGA6L4A6NEF3 574 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 TRIM64A6NGJ6 449 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 TRIM64BA6NI03 449 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 SLC22A5O76082 557 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 PTBP3O95758 552 aaKnown RBP0.69□□□□□ -2.3
ATL1-204ENST00000553746 MT-ND3P03897 115 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 ZNF35P13682 527 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 MAS1LP35410 378 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 TAS2R31P59538 309 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 IRX3P78415 501 aaPredicted RBP0.69□□□□□ -2.3
ATL1-204ENST00000553746 TWF1Q12792 350 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 CDH17Q12864 832 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 MRPL28Q13084 256 aaKnown RBP0.69□□□□□ -2.3
ATL1-204ENST00000553746 ZSCAN26Q16670 478 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 SP6Q3SY56 376 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 TCEAL5Q5H9L2 206 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 AVPI1Q5T686 147 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 H3F3CQ6NXT2 135 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 PLET1Q6UQ28 207 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 CCDC73Q6ZRK6 1079 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 TCF24Q7RTU0 167 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 CDR2LQ86X02 465 aaPredicted RBP0.69□□□□□ -2.3
ATL1-204ENST00000553746 SGPP2Q8IWX5 399 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 ZNF101Q8IZC7 436 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 MAGEE2Q8TD90 523 aaPredicted RBP0.69□□□□□ -2.3
ATL1-204ENST00000553746 TCEAL3Q969E4 200 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 GALNT14Q96FL9 552 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 IFT74Q96LB3 600 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 SENP8Q96LD8 212 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 SECISBP2Q96T21 854 aaKnown RBP0.69□□□□□ -2.3
ATL1-204ENST00000553746 TCHPQ9BT92 498 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 CHCHD7Q9BUK0 85 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 AZI2Q9H6S1 392 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 NIPAL2Q9H841 368 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 C21orf62Q9NYP8 219 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 EPS15L1Q9UBC2 864 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 NEBP20929 6669 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 DMBT1Q9UGM3 2413 aaPredicted RBP0.69□□□□□ -2.3
ATL1-204ENST00000553746 FRMPD1Q5SYB0 1578 aa0.69□□□□□ -2.3
ATL1-204ENST00000553746 MAP1AP78559 2803 aaPredicted RBP0.69□□□□□ -2.3
ATL1-204ENST00000553746 DICER1Q9UPY3 1922 aaKnown RBP0.68□□□□□ -2.3
ATL1-204ENST00000553746 MBLAC1A4D2B0 266 aaPredicted RBP0.68□□□□□ -2.3
ATL1-204ENST00000553746 D6RAR5 112 aa0.68□□□□□ -2.3
ATL1-204ENST00000553746 MFNGO00587 321 aa0.68□□□□□ -2.3
ATL1-204ENST00000553746 CDC40O60508 579 aaKnown RBP eCLIP0.68□□□□□ -2.3
ATL1-204ENST00000553746 REM1O75628 298 aa0.68□□□□□ -2.3
ATL1-204ENST00000553746 CLDN9O95484 217 aa0.68□□□□□ -2.3
ATL1-204ENST00000553746 AIFM1O95831 613 aa0.68□□□□□ -2.3
ATL1-204ENST00000553746 PAHP00439 452 aa0.68□□□□□ -2.3
ATL1-204ENST00000553746 AK1P00568 194 aa0.68□□□□□ -2.3
ATL1-204ENST00000553746 IGLV7-43P04211 117 aa0.68□□□□□ -2.3
ATL1-204ENST00000553746 DEFB103AP81534 67 aa0.68□□□□□ -2.3
ATL1-204ENST00000553746 CBX1P83916 185 aa0.68□□□□□ -2.3
ATL1-204ENST00000553746 QPRTQ15274 297 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms