RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 ZFYVE26Q68DK2 2539 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 ITPR1Q14643 2758 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 ASH1LQ9NR48 2969 aaKnown RBP2.25□□□□□ -2.05
SCFD1-210ENST00000553693 MYH4Q9Y623 1939 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 DSPP15924 2871 aaKnown RBP2.24□□□□□ -2.05
SCFD1-210ENST00000553693 PLIN4Q96Q06 1357 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 GOLGA8TH3BQL2 631 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 DNALI1O14645 258 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-210ENST00000553693 MGRN1O60291 552 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 INSP01308 110 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 IGHG4P01861 327 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 CRYGBP07316 175 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 ERCC1P07992 297 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-210ENST00000553693 GOLGA8HP0CJ92 632 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 OR8G3PP0DMU2 310 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 FOXN2P32314 431 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 NUP62P37198 522 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-210ENST00000553693 GLP1RP43220 463 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 KIR2DS2P43631 304 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 YAP1P46937 504 aaKnown RBP2.24□□□□□ -2.05
SCFD1-210ENST00000553693 GSSP48637 474 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 UGT2B15P54855 530 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 LIM2P55344 173 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 BIDP55957 195 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 YWHAGP61981 247 aaKnown RBP eCLIP2.24□□□□□ -2.05
SCFD1-210ENST00000553693 PAX5Q02548 391 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 DOC2AQ14183 400 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 STK38Q15208 465 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 TMEM52BQ4KMG9 183 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 TTC23LQ6PF05 361 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 SLC16A14Q7RTX9 510 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 LINC01551Q86U37 167 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 C17orf82Q86X59 251 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-210ENST00000553693 KATNAL2Q8IYT4 538 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 GABRG1Q8N1C3 465 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 EID2Q8N6I1 236 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 CXorf40AQ8TE69 158 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 PAQR8Q8TEZ7 354 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 PEX13Q92968 403 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 SGK3Q96BR1 496 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 PGLYRP4Q96LB8 373 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 KCTD14Q9BQ13 255 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-210ENST00000553693 BPIFA3Q9BQP9 254 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 MRPL45Q9BRJ2 306 aaKnown RBP2.24□□□□□ -2.05
SCFD1-210ENST00000553693 ZNF670Q9BS34 389 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 SRXN1Q9BYN0 137 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 SELENOIQ9C0D9 397 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 AUNIPQ9H7T9 357 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 GEMIN7Q9H840 131 aaKnown RBP2.24□□□□□ -2.05
SCFD1-210ENST00000553693 SH2D2AQ9NP31 389 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 PXMP2Q9NR77 195 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 GIN1Q9NXP7 522 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 UXTQ9UBK9 157 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-210ENST00000553693 STAP1Q9ULZ2 295 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 UBQLN1Q9UMX0 589 aaKnown RBP2.24□□□□□ -2.05
SCFD1-210ENST00000553693 ERVW-1Q9UQF0 538 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 CSDC2Q9Y534 153 aaKnown RBP2.24□□□□□ -2.05
SCFD1-210ENST00000553693 FAM208BQ5VWN6 2430 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 AKAP13Q12802 2813 aa2.24□□□□□ -2.05
SCFD1-210ENST00000553693 BPTFQ12830 3046 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 DMXL2Q8TDJ6 3036 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 NRCAMQ92823 1304 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 NSG1A0A0A6YYJ2 146 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 TRBV11-1A0A0K0K1C0 115 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 A6NDX4 124 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 FAM166BA8MTA8 275 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 H7C0C1 242 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 DCTN6O00399 190 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 HSD17B6O14756 317 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 RNF113AO15541 343 aaKnown RBP2.23□□□□□ -2.05
SCFD1-210ENST00000553693 TRAF3IP2O43734 574 aaPredicted RBP2.23□□□□□ -2.05
SCFD1-210ENST00000553693 NPIPB7O75200 414 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 SNAPINO95295 136 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 STAMBPO95630 424 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 TPM1P09493 284 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 HSPD1P10809 573 aaKnown RBP2.23□□□□□ -2.05
SCFD1-210ENST00000553693 MYL2P10916 166 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 HPGDP15428 266 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 ZNF823P16415 610 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 TCN1P20061 433 aaPredicted RBP2.23□□□□□ -2.05
SCFD1-210ENST00000553693 KITLGP21583 273 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 PRDX3P30048 256 aaKnown RBP2.23□□□□□ -2.05
SCFD1-210ENST00000553693 CTRLP40313 264 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 PMELP40967 661 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 OPRD1P41143 372 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 NAA10P41227 235 aaPredicted RBP2.23□□□□□ -2.05
SCFD1-210ENST00000553693 SLC1A1P43005 524 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 UQCRFS1P47985 274 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 ARRB1P49407 418 aaPredicted RBP2.23□□□□□ -2.05
SCFD1-210ENST00000553693 RAB9AP51151 201 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 RAB10P61026 200 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 SP4Q02446 784 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 NSUN5P1Q3KNT7 163 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 CARD16Q5EG05 197 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 PLCXD3Q63HM9 321 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 TMEM53Q6P2H8 277 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 CLEC2AQ6UVW9 174 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 PEX26Q7Z412 305 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 VTCN1Q7Z7D3 282 aa2.23□□□□□ -2.05
SCFD1-210ENST00000553693 OFCC1Q8IZS5 231 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms