RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 H2BFMP0C1H6 154 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 HSMCR30P0CW71 290 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 TMIGD3P0DMS9 266 aaPredicted RBP4.4□□□□□ -1.71
VTI1B-202ENST00000553619 OR8G3PP0DMU2 310 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 ZNF19P17023 458 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 CD53P19397 219 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 ALOX5APP20292 161 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 PCMT1P22061 227 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 CTSSP25774 331 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 PSMA1P25786 263 aaKnown RBP4.4□□□□□ -1.71
VTI1B-202ENST00000553619 APEX1P27695 318 aaKnown RBP4.4□□□□□ -1.71
VTI1B-202ENST00000553619 PSMB9P28065 219 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 MPGP29372 298 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 DCTDP32321 178 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 OPRM1P35372 400 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 ARR3P36575 388 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 NAA10P41227 235 aaPredicted RBP4.4□□□□□ -1.71
VTI1B-202ENST00000553619 ALDH3B2P48448 385 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 TDGF1P3P51864 188 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 RIDAP52758 137 aaKnown RBP4.4□□□□□ -1.71
VTI1B-202ENST00000553619 ROR2Q01974 943 aaKnown RBP4.4□□□□□ -1.71
VTI1B-202ENST00000553619 RUNX1T1Q06455 604 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 ECH1Q13011 328 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 AQP6Q13520 282 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 EIF2B1Q14232 305 aaKnown RBP4.4□□□□□ -1.71
VTI1B-202ENST00000553619 NEDD8Q15843 81 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 ETFDHQ16134 617 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 C3AR1Q16581 482 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 PCK2Q16822 640 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 TIGD6Q17RP2 521 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 RNF151Q2KHN1 245 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 CEACAM16Q2WEN9 425 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 SLC36A2Q495M3 483 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 ACSF3Q4G176 576 aaPredicted RBP4.4□□□□□ -1.71
VTI1B-202ENST00000553619 ARMCX4Q5H9R4 360 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 TSPO2Q5TGU0 170 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 UBE2UQ5VVX9 321 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 OR7E24Q6IFN5 339 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 TMEM53Q6P2H8 277 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 MTFR2Q6P444 385 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 KLHL24Q6TFL4 600 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 ZNF322Q6U7Q0 402 aaPredicted RBP4.4□□□□□ -1.71
VTI1B-202ENST00000553619 GDPGP1Q6ZNW5 385 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 SSX8Q7RTT4 187 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 DPY19L4Q7Z388 723 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 DOLPP1Q86YN1 238 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 ZNF679Q8IYX0 411 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 YIPF7Q8N8F6 280 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 CNEP1R1Q8N9A8 125 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 SLC26A10Q8NG04 563 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 C11orf40Q8WZ69 217 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 MUL1Q969V5 352 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 NMD3Q96D46 503 aaKnown RBP4.4□□□□□ -1.71
VTI1B-202ENST00000553619 DGCR14Q96DF8 476 aaKnown RBP4.4□□□□□ -1.71
VTI1B-202ENST00000553619 COG8Q96MW5 612 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 SIGLEC11Q96RL6 698 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 MGLLQ99685 303 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 FOXB1Q99853 325 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 ARPC5LQ9BPX5 153 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 VKORC1Q9BQB6 163 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 BCL7BQ9BQE9 202 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 ALG8Q9BVK2 526 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 SFXN3Q9BWM7 321 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 HDHD5Q9BXW7 423 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 PIGMQ9H3S5 423 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 RNF121Q9H920 327 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 CRLF2Q9HC73 371 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 MOV10Q9HCE1 1003 aaKnown RBP4.4□□□□□ -1.71
VTI1B-202ENST00000553619 SMURF1Q9HCE7 757 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 TRIM36Q9NQ86 728 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 PAK1IP1Q9NWT1 392 aaPredicted RBP4.4□□□□□ -1.71
VTI1B-202ENST00000553619 LUZP4Q9P127 313 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 ZNF629Q9UEG4 869 aaPredicted RBP4.4□□□□□ -1.71
VTI1B-202ENST00000553619 TIMM10BQ9Y5J6 103 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 WDR87Q6ZQQ6 2873 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 SVILO95425 2214 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 DOCK7Q96N67 2140 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 A0A1B0GUH1 482 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 A0A1W2PQL4 384 aaPredicted RBP4.39□□□□□ -1.71
VTI1B-202ENST00000553619 CIB4A0PJX0 185 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 CCDC160A6NGH7 325 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 ACOD1A6NK06 481 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 EIF4E1BA6NMX2 242 aaKnown RBP4.39□□□□□ -1.71
VTI1B-202ENST00000553619 CCRL2O00421 344 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 DVL2O14641 736 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 SELENOFO60613 162 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 SLC19A2O60779 497 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 UPK3AO75631 287 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 TFP02787 698 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 CD1AP06126 327 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 MRPL3P09001 348 aaKnown RBP4.39□□□□□ -1.71
VTI1B-202ENST00000553619 SPARCP09486 303 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 LIMS3P0CW19 117 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 LIMS4P0CW20 117 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 SMIM18P0DKX4 95 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 KLK2P20151 261 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 HSD11B1P28845 292 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 AGTR1P30556 359 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 CEACAM8P31997 349 aaPredicted RBP4.39□□□□□ -1.71
VTI1B-202ENST00000553619 RANBP1P43487 201 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms