RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 METTL7AQ9H8H3 244 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 TMEM9BQ9NQ34 198 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 HRASLS2Q9NWW9 162 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 PISDQ9UG56 409 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 CSDC2Q9Y534 153 aaKnown RBP1.47□□□□□ -2.17
CCDC38-206ENST00000548771 TSSC4Q9Y5U2 329 aaPredicted RBP1.47□□□□□ -2.17
CCDC38-206ENST00000548771 IGLV1-36A0A0B4J1U3 117 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 C5orf63A6NC05 138 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 ZNF716A6NP11 495 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 LYRM9A8MSI8 78 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 H0YJW9 148 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 DNASE2O00115 360 aaPredicted RBP1.46□□□□□ -2.18
CCDC38-206ENST00000548771 POLR1CO15160 346 aaPredicted RBP1.46□□□□□ -2.18
CCDC38-206ENST00000548771 NVLO15381 856 aaKnown RBP1.46□□□□□ -2.18
CCDC38-206ENST00000548771 SOCS1O15524 211 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 KLHL41O60662 606 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 REM1O75628 298 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 TSPAN13O95857 204 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 NDUFB10O96000 172 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 CRYGBP07316 175 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 CD37P11049 281 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 ERGP11308 486 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 ME2P23368 584 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 TNNT2P45379 298 aaPredicted RBP1.46□□□□□ -2.18
CCDC38-206ENST00000548771 ACTR3P61158 418 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 CCNA1P78396 465 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 TGM3Q08188 693 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 GPR107Q5VW38 600 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 Q6ZSR3 168 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 MRPL55Q7Z7F7 128 aaKnown RBP1.46□□□□□ -2.18
CCDC38-206ENST00000548771 NKAIN4Q8IVV8 208 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 MIR7-3HGQ8N6C7 128 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 PRELID2Q8N945 189 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 TTLQ8NG68 377 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 TMEM230Q96A57 120 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 EEF1AKMT3Q96AZ1 226 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 CENPKQ9BS16 269 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 FGF23Q9GZV9 251 aaPredicted RBP1.46□□□□□ -2.18
CCDC38-206ENST00000548771 VANGL2Q9ULK5 521 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 TMCC3Q9ULS5 477 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 UBIAD1Q9Y5Z9 338 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 USP47Q96K76 1375 aa1.46□□□□□ -2.18
CCDC38-206ENST00000548771 FAM47DPA6NHR8 397 aa1.45□□□□□ -2.18
CCDC38-206ENST00000548771 SEMA3DO95025 777 aa1.45□□□□□ -2.18
CCDC38-206ENST00000548771 ARG1P05089 322 aa1.45□□□□□ -2.18
CCDC38-206ENST00000548771 U2AF2P26368 475 aaKnown RBP eCLIP1.45□□□□□ -2.18
CCDC38-206ENST00000548771 CDH6P55285 790 aa1.45□□□□□ -2.18
CCDC38-206ENST00000548771 SYNJ2BPP57105 145 aa1.45□□□□□ -2.18
CCDC38-206ENST00000548771 EIF3EP60228 445 aaKnown RBP1.45□□□□□ -2.18
CCDC38-206ENST00000548771 STXBP1P61764 594 aaKnown RBP1.45□□□□□ -2.18
CCDC38-206ENST00000548771 ZNF726P1Q15940 193 aa1.45□□□□□ -2.18
CCDC38-206ENST00000548771 C9orf135Q5VTT2 229 aa1.45□□□□□ -2.18
CCDC38-206ENST00000548771 TMEM105Q8N8V8 129 aa1.45□□□□□ -2.18
CCDC38-206ENST00000548771 CHST4Q8NCG5 386 aa1.45□□□□□ -2.18
CCDC38-206ENST00000548771 OR10AD1Q8NGE0 317 aa1.45□□□□□ -2.18
CCDC38-206ENST00000548771 OR56B2PQ8NGI1 322 aa1.45□□□□□ -2.18
CCDC38-206ENST00000548771 C17orf50Q8WW18 174 aa1.45□□□□□ -2.18
CCDC38-206ENST00000548771 APH1BQ8WW43 257 aa1.45□□□□□ -2.18
CCDC38-206ENST00000548771 ECHDC3Q96DC8 303 aa1.45□□□□□ -2.18
CCDC38-206ENST00000548771 DUS3LQ96G46 650 aaKnown RBP1.45□□□□□ -2.18
CCDC38-206ENST00000548771 RSG1Q9BU20 258 aa1.45□□□□□ -2.18
CCDC38-206ENST00000548771 TEKT3Q9BXF9 490 aa1.45□□□□□ -2.18
CCDC38-206ENST00000548771 PKIBQ9C010 78 aa1.45□□□□□ -2.18
CCDC38-206ENST00000548771 EXTL2Q9UBQ6 330 aa1.45□□□□□ -2.18
CCDC38-206ENST00000548771 LGALS13Q9UHV8 139 aa1.45□□□□□ -2.18
CCDC38-206ENST00000548771 ASB3Q9Y575 518 aa1.45□□□□□ -2.18
CCDC38-206ENST00000548771 TRIP11Q15643 1979 aa1.45□□□□□ -2.18
CCDC38-206ENST00000548771 ADGRL1O94910 1474 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 HEATR9A2RTY3 570 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 SMCO3A2RU48 225 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 GABRR3A8MPY1 467 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 C16orf90A8MZG2 172 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 H0Y8G0 127 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 H7C417 338 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 H6PDO95479 791 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 CTSLP07711 333 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 TROVE2P10155 538 aaKnown RBP eCLIP1.44□□□□□ -2.18
CCDC38-206ENST00000548771 EIF2S2P20042 333 aaKnown RBP1.44□□□□□ -2.18
CCDC38-206ENST00000548771 RRM2P31350 389 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 TAGLN2P37802 199 aaKnown RBP1.44□□□□□ -2.18
CCDC38-206ENST00000548771 SLC1A1P43005 524 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 SULT1E1P49888 294 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 ATP5IP56385 69 aaPredicted RBP1.44□□□□□ -2.18
CCDC38-206ENST00000548771 SP4Q02446 784 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 PSMD5Q16401 504 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 SOHLH1Q5JUK2 328 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 UBE2UQ5VVX9 321 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 ADNP2Q6IQ32 1131 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 SLC8B1Q6J4K2 584 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 SPINT4Q6UDR6 99 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 CERS6Q6ZMG9 384 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 FAM228AQ86W67 206 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 CDR2LQ86X02 465 aaPredicted RBP1.44□□□□□ -2.18
CCDC38-206ENST00000548771 CBR4Q8N4T8 237 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 CSGALNACT2Q8N6G5 542 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 TMEM104Q8NE00 496 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 OR11H7Q8NGC8 314 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 OR1P1Q8NH06 330 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 SLC2A14Q8TDB8 520 aa1.44□□□□□ -2.18
CCDC38-206ENST00000548771 COL21A1Q96P44 957 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms