RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 NIPAL2Q9H841 368 aa15.13■□□□□ 0.01
PTPRO-209ENST00000543886 PCSK5Q92824 1860 aa15.13■□□□□ 0.01
PTPRO-209ENST00000543886 TRAV6A0A075B6T7 132 aa15.13■□□□□ 0.01
PTPRO-209ENST00000543886 ACOT7O00154 380 aa15.13■□□□□ 0.01
PTPRO-209ENST00000543886 TCRBP04435 133 aa15.13■□□□□ 0.01
PTPRO-209ENST00000543886 ACSM4P0C7M7 580 aa15.13■□□□□ 0.01
PTPRO-209ENST00000543886 B3GALT5-AS1P59052 145 aa15.13■□□□□ 0.01
PTPRO-209ENST00000543886 PSMA6P60900 246 aaKnown RBP15.13■□□□□ 0.01
PTPRO-209ENST00000543886 CD83Q01151 205 aa15.13■□□□□ 0.01
PTPRO-209ENST00000543886 PLA2G7Q13093 441 aa15.13■□□□□ 0.01
PTPRO-209ENST00000543886 PHF21AQ96BD5 680 aa15.13■□□□□ 0.01
PTPRO-209ENST00000543886 OR2M2Q96R28 347 aa15.13■□□□□ 0.01
PTPRO-209ENST00000543886 MOB1AQ9H8S9 216 aa15.13■□□□□ 0.01
PTPRO-209ENST00000543886 RANGRFQ9HD47 186 aaPredicted RBP15.13■□□□□ 0.01
PTPRO-209ENST00000543886 RCE1Q9Y256 329 aa15.13■□□□□ 0.01
PTPRO-209ENST00000543886 XRCC3O43542 346 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 SYT7O43581 403 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 DNPH1O43598 174 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 GLSO94925 669 aaPredicted RBP15.12■□□□□ 0.01
PTPRO-209ENST00000543886 WDPCPO95876 746 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 TTRP02766 147 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 HTR2CP28335 458 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 C2orf76Q3KRA6 126 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 ANKRD16Q6P6B7 361 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 RHOUQ7L0Q8 258 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 TMEM54Q969K7 222 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 PNPLA2Q96AD5 504 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 ZNF385AQ96PM9 386 aaKnown RBP15.12■□□□□ 0.01
PTPRO-209ENST00000543886 BEX2Q9BXY8 128 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 SLA2Q9H6Q3 261 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 DIABLOQ9NR28 239 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 STMN3Q9NZ72 180 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 MRPL15Q9P015 296 aaKnown RBP15.12■□□□□ 0.01
PTPRO-209ENST00000543886 MED12Q93074 2177 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 LRRC3CA6NJW4 275 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 LMX1BO60663 402 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 TRAPPC6AO75865 159 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 YES1P07947 543 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 SPOCK1Q08629 439 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 SGCAQ16586 387 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 GLYATL3Q5SZD4 288 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 HES3Q5TGS1 186 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 FAM166AQ6J272 317 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 JMJD6Q6NYC1 403 aaPredicted RBP15.12■□□□□ 0.01
PTPRO-209ENST00000543886 NKAIN3Q8N8D7 197 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 OR51A2Q8NGJ7 313 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 OR6M1Q8NGM8 313 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 PSMF1Q92530 271 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 AKAP1Q92667 903 aaKnown RBP eCLIP15.12■□□□□ 0.01
PTPRO-209ENST00000543886 SFXN2Q96NB2 322 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 SRXN1Q9BYN0 137 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 SLC17A5Q9NRA2 495 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 ZNF275Q9NSD4 429 aaPredicted RBP15.12■□□□□ 0.01
PTPRO-209ENST00000543886 PCDHGA1Q9Y5H4 931 aa15.12■□□□□ 0.01
PTPRO-209ENST00000543886 A0A1B0GVI7 797 aa15.11■□□□□ 0.01
PTPRO-209ENST00000543886 GGT3PA6NGU5 568 aa15.11■□□□□ 0.01
PTPRO-209ENST00000543886 RER1O15258 196 aa15.11■□□□□ 0.01
PTPRO-209ENST00000543886 CTAG2O75638 210 aa15.11■□□□□ 0.01
PTPRO-209ENST00000543886 CCR6P51684 374 aa15.11■□□□□ 0.01
PTPRO-209ENST00000543886 EFNB2P52799 333 aa15.11■□□□□ 0.01
PTPRO-209ENST00000543886 RRAS2P62070 204 aaPredicted RBP15.11■□□□□ 0.01
PTPRO-209ENST00000543886 JAGN1Q8N5M9 183 aa15.11■□□□□ 0.01
PTPRO-209ENST00000543886 KLK11Q9UBX7 282 aa15.11■□□□□ 0.01
PTPRO-209ENST00000543886 CGGBP1Q9UFW8 167 aaPredicted RBP15.11■□□□□ 0.01
PTPRO-209ENST00000543886 KIAA1549Q9HCM3 1950 aa15.11■□□□□ 0.01
PTPRO-209ENST00000543886 DCDC2BA2VCK2 349 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 A6NL46 340 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 F10P00742 488 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 RFPL3SP0C7P2 107 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 PTHLHP12272 177 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 MSR1P21757 451 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 ENPP1P22413 925 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 GDF1P27539 372 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 CASRP41180 1078 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 RAC3P60763 192 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 LSM6P62312 80 aaKnown RBP15.1■□□□□ 0.01
PTPRO-209ENST00000543886 C10orf128Q5T292 105 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 TMEM123Q8N131 208 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 GRPEL2Q8TAA5 225 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 FGGYQ96C11 551 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 NKX3-1Q99801 234 aaPredicted RBP15.1■□□□□ 0.01
PTPRO-209ENST00000543886 TMEM246Q9BRR3 403 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 KCNK15Q9H427 330 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 DEPPQ9NTK1 212 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 LRFN1Q9P244 771 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 MRPS18BQ9Y676 258 aaKnown RBP15.1■□□□□ 0.01
PTPRO-209ENST00000543886 TMEM272A0A1B0GTI8 110 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 NAP1L6A6NFF2 107 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 SMAD9O15198 467 aaKnown RBP15.1■□□□□ 0.01
PTPRO-209ENST00000543886 CNR1P21554 472 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 GNALP38405 381 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 PRKXP51817 358 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 CARD18P57730 90 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 GRB2P62993 217 aaKnown RBP15.1■□□□□ 0.01
PTPRO-209ENST00000543886 ABHD17BQ5VST6 288 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 UTS2BQ765I0 119 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 COMMD2Q86X83 199 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 SLC25A28Q96A46 364 aa15.1■□□□□ 0.01
PTPRO-209ENST00000543886 FYTTD1Q96QD9 318 aaKnown RBP15.1■□□□□ 0.01
PTPRO-209ENST00000543886 SF3B5Q9BWJ5 86 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms