RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 CLDN14O95500 239 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 BGLAPP02818 100 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 MT-ND1P03886 318 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 YES1P07947 543 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 CALCBP10092 127 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 NQO1P15559 274 aaKnown RBP4.49□□□□□ -1.69
CLIP1-217ENST00000543205 RPA2P15927 270 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 CFPP27918 469 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 GRPRP30550 384 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 RRM2P31350 389 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 UGT2B15P54855 530 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 H3F3AP84243 136 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 FOXF2Q12947 444 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 PMS2P3Q13401 168 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 DGCR6Q14129 220 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 PDK3Q15120 406 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 ZNF74Q16587 644 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 ZSCAN26Q16670 478 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 SLC25A35Q3KQZ1 300 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 FGD3Q5JSP0 725 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 TSEN54Q7Z6J9 526 aaKnown RBP4.49□□□□□ -1.69
CLIP1-217ENST00000543205 ADGRG5Q8IZF4 528 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 RNF113BQ8IZP6 322 aaKnown RBP4.49□□□□□ -1.69
CLIP1-217ENST00000543205 TMEM99Q8N816 258 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 NUDT10Q8NFP7 164 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 PFN4Q8NHR9 129 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 CANT1Q8WVQ1 401 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 ITLN2Q8WWU7 325 aaPredicted RBP4.49□□□□□ -1.69
CLIP1-217ENST00000543205 LIPHQ8WWY8 451 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 ACOT11Q8WXI4 607 aaPredicted RBP4.49□□□□□ -1.69
CLIP1-217ENST00000543205 DAZAP1Q96EP5 407 aaKnown RBP4.49□□□□□ -1.69
CLIP1-217ENST00000543205 NUDT11Q96G61 164 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 PSD2Q9BQI7 771 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 ZNF426Q9BUY5 554 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 SF3B5Q9BWJ5 86 aaKnown RBP4.49□□□□□ -1.69
CLIP1-217ENST00000543205 PIGMQ9H3S5 423 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 FKRPQ9H9S5 495 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 CHST11Q9NPF2 352 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 NANSQ9NR45 359 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 MAN2C1Q9NTJ4 1040 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 CNOT2Q9NZN8 540 aaKnown RBP4.49□□□□□ -1.69
CLIP1-217ENST00000543205 UBQLN2Q9UHD9 624 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 ZNF229Q9UJW7 825 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 PROCRQ9UNN8 238 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 RASD1Q9Y272 281 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 B3GALT5Q9Y2C3 310 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 POLEQ07864 2286 aa4.49□□□□□ -1.69
CLIP1-217ENST00000543205 RP1L1Q8IWN7 2480 aaPredicted RBP4.49□□□□□ -1.69
CLIP1-217ENST00000543205 PRRC2CQ9Y520 2896 aaKnown RBP4.48□□□□□ -1.69
CLIP1-217ENST00000543205 A0A087WUU8 490 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 TCRBV3S1A0A5B6 114 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 CLEC18AA5D8T8 446 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 ZNF724A8MTY0 619 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 ZNF814B7Z6K7 855 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 EEF1E1-BLOC1S5C9J1V9 151 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 FTCDNL1E5RQL4 147 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 TNFRSF11BO00300 401 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 GPR171O14626 319 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 EEF1E1O43324 174 aaKnown RBP4.48□□□□□ -1.69
CLIP1-217ENST00000543205 OR7A10O76100 309 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 VAMP5O95183 116 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 CST1P01037 141 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 IGF2P01344 180 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 S100A6P06703 90 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 SAGP10523 405 aaPredicted RBP4.48□□□□□ -1.69
CLIP1-217ENST00000543205 IFI30P13284 250 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 ZNF43P17038 809 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 KLK2P20151 261 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 PRKACBP22694 351 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 TUBG1P23258 451 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 NUP62P37198 522 aaPredicted RBP4.48□□□□□ -1.69
CLIP1-217ENST00000543205 IFNGR2P38484 337 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 CAPGP40121 348 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 MAGEA2P43356 314 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 PRKCDQ05655 676 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 LTBQ06643 244 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 C1DQ13901 141 aaKnown RBP4.48□□□□□ -1.69
CLIP1-217ENST00000543205 OR2T5Q6IEZ7 315 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 TBPL2Q6SJ96 375 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 CLEC18BQ6UXF7 455 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 MBOAT2Q6ZWT7 520 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 ERASQ7Z444 233 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 NRMQ8IXM6 262 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 C10orf67Q8IYJ2 551 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 SCAIQ8N9R8 606 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 CLEC18CQ8NCF0 446 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 OR6K3Q8NGY3 331 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 OR2T29Q8NH02 315 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 OR5J2Q8NH18 312 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 BPIFA2Q96DR5 249 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 AJUBAQ96IF1 538 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 MRPL37Q9BZE1 423 aaKnown RBP4.48□□□□□ -1.69
CLIP1-217ENST00000543205 FAM192AQ9GZU8 254 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 REEP1Q9H902 201 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 SAP30LQ9HAJ7 183 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 KCNJ16Q9NPI9 418 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 MEPEQ9NQ76 525 aaPredicted RBP4.48□□□□□ -1.69
CLIP1-217ENST00000543205 TUBG2Q9NRH3 451 aa4.48□□□□□ -1.69
CLIP1-217ENST00000543205 MRPL39Q9NYK5 338 aaKnown RBP4.48□□□□□ -1.69
CLIP1-217ENST00000543205 RNF150Q9ULK6 438 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms