RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.64□□□□□ -1.99
USP28-210ENST00000542033 FBLL1A6NHQ2 334 aaKnown RBP2.64□□□□□ -1.99
USP28-210ENST00000542033 LRRC30A6NM36 301 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 A8MUA0 341 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 NPIPA7E9PJI5 369 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 PPIAL4DF5H284 164 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 FOXE1O00358 373 aaPredicted RBP2.64□□□□□ -1.99
USP28-210ENST00000542033 BTN3A3O00478 584 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 SDHDO14521 159 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 CDIPTO14735 213 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 ARPC5O15511 151 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 FAM189A1O60320 539 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 TPST1O60507 370 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 KCNK2O95069 426 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 FGGP02679 453 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 RLN2P04090 185 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 TSPAN19P0C672 248 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 GIMD1P0DJR0 217 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 NPIPA8P0DM63 369 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 ZNF250P15622 560 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 HIST1H1BP16401 226 aaKnown RBP2.64□□□□□ -1.99
USP28-210ENST00000542033 TSPAN8P19075 237 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 MAGP20916 626 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 ZNF10P21506 573 aaPredicted RBP2.64□□□□□ -1.99
USP28-210ENST00000542033 DDTP30046 118 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 SLC6A1P30531 599 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 CALCRP30988 508 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 SDC4P31431 198 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 FCGR2CP31995 323 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 PMELP40967 661 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 RAB5CP51148 216 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 WNT4P56705 351 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 RPS20P60866 119 aaKnown RBP2.64□□□□□ -1.99
USP28-210ENST00000542033 OSTNP61366 133 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 MRPS6P82932 125 aaKnown RBP2.64□□□□□ -1.99
USP28-210ENST00000542033 GNA12Q03113 381 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 CAV1Q03135 178 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 EMX2Q04743 252 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 PAX8Q06710 450 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 ZP4Q12836 540 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 PNOCQ13519 176 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 MESDQ14696 234 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 CDKN3Q16667 212 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 SBK1Q52WX2 424 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 BEX5Q5H9J7 111 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 CELF3Q5SZQ8 465 aaKnown RBP2.64□□□□□ -1.99
USP28-210ENST00000542033 GPRC6AQ5T6X5 926 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 TTC23Q5W5X9 447 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 CARD17Q5XLA6 110 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 FBXW9Q5XUX1 488 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 KDM4DQ6B0I6 523 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 DMKNQ6E0U4 476 aaPredicted RBP2.64□□□□□ -1.99
USP28-210ENST00000542033 ZNF470Q6ECI4 717 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 FAHD2BQ6P2I3 314 aaPredicted RBP2.64□□□□□ -1.99
USP28-210ENST00000542033 PNCKQ6P2M8 343 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 LEG1Q6P5S2 330 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 SLC35D2Q76EJ3 337 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 PRSS48Q7RTY5 328 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 PID1Q7Z2X4 250 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 TIPARPQ7Z3E1 657 aaKnown RBP2.64□□□□□ -1.99
USP28-210ENST00000542033 RAB43Q86YS6 212 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 FAM71AQ8IYT1 594 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 OFCC1Q8IZS5 231 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 LRRC18Q8N456 261 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 C9orf62Q8N4C0 152 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 HSD17B11Q8NBQ5 300 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 NFAM1Q8NET5 270 aaPredicted RBP2.64□□□□□ -1.99
USP28-210ENST00000542033 OR5B17Q8NGF7 314 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 OR13F1Q8NGS4 319 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 TRMT10AQ8TBZ6 339 aaKnown RBP2.64□□□□□ -1.99
USP28-210ENST00000542033 C16orf78Q8WTQ4 265 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 CA5BP1Q8WTZ4 195 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 C10orf82Q8WW14 230 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 SLC7A6Q92536 515 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 RASL10AQ92737 203 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 OSTF1Q92882 214 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 TOP1MTQ969P6 601 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 MYLPFQ96A32 169 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 CREB3L1Q96BA8 519 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 MED8Q96G25 268 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 FAHD2AQ96GK7 314 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 AKR1E2Q96JD6 320 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 PRRC1Q96M27 445 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 Q96MT0 163 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 KCNA7Q96RP8 456 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 CHP1Q99653 195 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 RBBP8Q99708 897 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 NAT9Q9BTE0 207 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 DCUN1D5Q9BTE7 237 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 CCDC32Q9BV29 185 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 UGT2B28Q9BY64 529 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 ANKRD60Q9BZ19 345 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 ACTR6Q9GZN1 396 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 ROGDIQ9GZN7 287 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 COMMD4Q9H0A8 199 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 PARLQ9H300 379 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 NXF3Q9H4D5 531 aaKnown RBP2.64□□□□□ -1.99
USP28-210ENST00000542033 REEP4Q9H6H4 257 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 NT5DC2Q9H857 520 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 METTL7AQ9H8H3 244 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms