RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 MMP15P51511 669 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 RPS15P62841 145 aaKnown RBP14.51□□□□□ -0.09
VARS2-212ENST00000542001 MFAP5Q13361 173 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 INPP5JQ15735 1006 aaPredicted RBP14.51□□□□□ -0.09
VARS2-212ENST00000542001 BRICD5Q6PL45 260 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 MOB3CQ70IA8 216 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 OR2AK2Q8NG84 335 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 OTOSQ8NHW6 89 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 AMELYQ99218 206 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 TXNIPQ9H3M7 391 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 GPR173Q9NS66 373 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 NOTCH4Q99466 2003 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 TEX51A0A1B0GUA7 166 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 TOR1AO14656 332 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 IGHV4-34P06331 123 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 PATE4P0C8F1 98 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 RIN1Q13671 783 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 MESTQ5EB52 335 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 TOR2AQ5JU69 321 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 STX12Q86Y82 276 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 ZSCAN1Q8NBB4 408 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 OR52N5Q8NH56 324 aa14.51□□□□□ -0.09
VARS2-212ENST00000542001 SP7Q8TDD2 431 aaPredicted RBP14.51□□□□□ -0.09
VARS2-212ENST00000542001 RBPMSQ93062 196 aaKnown RBP14.51□□□□□ -0.09
VARS2-212ENST00000542001 FOLR3P41439 243 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 PER3P56645 1201 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 DOC2BQ14184 412 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 TAF9Q16594 264 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 HACD4Q5VWC8 232 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 OR1J2Q8NGS2 313 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 HAVCR2Q8TDQ0 301 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 C11orf40Q8WZ69 217 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 SPTSSAQ969W0 71 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 PHF7Q9BWX1 381 aaPredicted RBP14.5□□□□□ -0.09
VARS2-212ENST00000542001 NXF2Q9GZY0 626 aaKnown RBP14.5□□□□□ -0.09
VARS2-212ENST00000542001 TCF20Q9UGU0 1960 aaKnown RBP14.5□□□□□ -0.09
VARS2-212ENST00000542001 H3BMH7 237 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 ADAM11O75078 769 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 MTRF1O75570 445 aaKnown RBP14.5□□□□□ -0.09
VARS2-212ENST00000542001 TCN2P20062 427 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 RAB6AP20340 208 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 BCKDHBP21953 392 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 HOXC12P31275 282 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 MAP2K6P52564 334 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 KRBOX4Q5JUW0 171 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 SLC22A24Q8N4F4 322 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 OR1J4Q8NGS1 313 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 C4orf45Q96LM5 186 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 SF3B6Q9Y3B4 125 aaKnown RBP14.5□□□□□ -0.09
VARS2-212ENST00000542001 EIF4E2O60573 245 aaKnown RBP14.5□□□□□ -0.09
VARS2-212ENST00000542001 PVALBP20472 110 aaPredicted RBP14.5□□□□□ -0.09
VARS2-212ENST00000542001 EPHA4P54764 986 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 GSG1Q2KHT4 349 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 SULF2Q8IWU5 870 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 TCTE3Q8IZS6 198 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 ST8SIA4Q92187 359 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 VWCEQ96DN2 955 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 CHST11Q9NPF2 352 aa14.5□□□□□ -0.09
VARS2-212ENST00000542001 TRAV1-2A0A0B4J238 106 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 MEX3AA1L020 520 aaKnown RBP14.49□□□□□ -0.09
VARS2-212ENST00000542001 ARPC3O15145 178 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 PIAS2O75928 621 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 OR8U9P0C7N5 309 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 NME1P15531 152 aaKnown RBP14.49□□□□□ -0.09
VARS2-212ENST00000542001 CCR5P51681 352 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 PWWP2BQ6NUJ5 590 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 TEX261Q6UWH6 196 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 SLAMF9Q96A28 289 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 OR8B4Q96RC9 309 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 PPA2Q9H2U2 334 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 CALHM2Q9HA72 323 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 ETV7Q9Y603 341 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 U3KQ87 197 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 hCG_1807616A0A1W2PRN6 198 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 CX3CR1P49238 355 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 ABHD17BQ5VST6 288 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 PLCXD3Q63HM9 321 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 AAED1Q7RTV5 226 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 C20orf196Q8IYI0 205 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 AGBL5Q8NDL9 886 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 TMED6Q8WW62 240 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 ZNRF4Q8WWF5 429 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 IGHV1OR21-1A0A087WYE8 117 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 IGHV1OR15-9A0A0B4J2B8 117 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 SYNGR4O95473 234 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 MT-ATP6P00846 226 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 SRFP11831 508 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 PPP3CBP16298 524 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 POU3F2P20265 443 aaPredicted RBP14.49□□□□□ -0.09
VARS2-212ENST00000542001 FASLGP48023 281 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 EIF5AP63241 154 aaKnown RBP14.49□□□□□ -0.09
VARS2-212ENST00000542001 PPA1Q15181 289 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 ZBTB37Q5TC79 503 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 SLC16A14Q7RTX9 510 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 SGPP2Q8IWX5 399 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 CMSS1Q9BQ75 279 aaKnown RBP14.49□□□□□ -0.09
VARS2-212ENST00000542001 SDHAF2Q9NX18 166 aa14.49□□□□□ -0.09
VARS2-212ENST00000542001 ZNF230Q9UIE0 474 aaPredicted RBP14.49□□□□□ -0.09
VARS2-212ENST00000542001 FAHP16930 419 aa14.48□□□□□ -0.09
VARS2-212ENST00000542001 CPEB2Q7Z5Q1 589 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms