RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 RNF133Q8WVZ7 376 aa12.36□□□□□ -0.43
CD4-208ENST00000538827 COG8Q96MW5 612 aa12.36□□□□□ -0.43
CD4-208ENST00000538827 ATF6BQ99941 703 aa12.36□□□□□ -0.43
CD4-208ENST00000538827 OR2H1Q9GZK4 316 aa12.36□□□□□ -0.43
CD4-208ENST00000538827 COQ3Q9NZJ6 369 aa12.36□□□□□ -0.43
CD4-208ENST00000538827 ZNF629Q9UEG4 869 aaPredicted RBP12.36□□□□□ -0.43
CD4-208ENST00000538827 FBXL3Q9UKT7 428 aa12.36□□□□□ -0.43
CD4-208ENST00000538827 SLC5A6Q9Y289 635 aa12.36□□□□□ -0.43
CD4-208ENST00000538827 OTOGQ6ZRI0 2925 aa12.36□□□□□ -0.43
CD4-208ENST00000538827 MYO7BQ6PIF6 2116 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 A0A1B0GUH1 482 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 ZNF503-AS2A6NEH8 195 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 CCDC160A6NGH7 325 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 E9PI62 339 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 SULT1C4O75897 302 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 ABHD16AO95870 558 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 OPRL1P41146 370 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 PRKXP51817 358 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 GRB2P62993 217 aaKnown RBP12.35□□□□□ -0.43
CD4-208ENST00000538827 ADORA2A-AS1P86434 159 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 ROM1Q03395 351 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 MFGE8Q08431 387 aaPredicted RBP12.35□□□□□ -0.43
CD4-208ENST00000538827 P2RY6Q15077 328 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 GABRA6Q16445 453 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 ZNF829Q3KNS6 432 aaPredicted RBP12.35□□□□□ -0.43
CD4-208ENST00000538827 PABPC1L2AQ5JQF8 200 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 ZNF684Q5T5D7 378 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 SYT6Q5T7P8 510 aaPredicted RBP12.35□□□□□ -0.43
CD4-208ENST00000538827 LIPNQ5VXI9 398 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 LIPKQ5VXJ0 399 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 SYT9Q86SS6 491 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 ZNF283Q8N7M2 679 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 C1orf162Q8NEQ5 155 aaPredicted RBP12.35□□□□□ -0.43
CD4-208ENST00000538827 OR13F1Q8NGS4 319 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 CCDC120Q96HB5 630 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 HDHD2Q9H0R4 259 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 WNT5BQ9H1J7 359 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 NOX3Q9HBY0 568 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 BRD7Q9NPI1 651 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 PNRC2Q9NPJ4 139 aaKnown RBP12.35□□□□□ -0.43
CD4-208ENST00000538827 BABAM2Q9NXR7 383 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 ZNF224Q9NZL3 707 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 TIMM10BQ9Y5J6 103 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 N6AMT1Q9Y5N5 214 aa12.35□□□□□ -0.43
CD4-208ENST00000538827 CSMD1Q96PZ7 3565 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 ESPL1Q14674 2120 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 A1L4Q6 167 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 LOC110117498-PIK3R3F6TDL0 507 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 CCRL2O00421 344 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 LRRTM2O43300 516 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 NOL3O60936 208 aaKnown RBP12.34□□□□□ -0.43
CD4-208ENST00000538827 ZNF254O75437 659 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 MMP7P09237 267 aaPredicted RBP12.34□□□□□ -0.43
CD4-208ENST00000538827 CHRNB4P30926 498 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 ARR3P36575 388 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 LIPAP38571 399 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 SLC6A9P48067 706 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 CX3CR1P49238 355 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 HIST1H3AP68431 136 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 PSG4Q00888 419 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 GALK2Q01415 458 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 SLC3A1Q07837 685 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 GSG1Q2KHT4 349 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 SFRP5Q5T4F7 317 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 HIST2H3PS2Q5TEC6 136 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 ALKBH2Q6NS38 261 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 ZNF544Q6NX49 715 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 HIST2H3AQ71DI3 136 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 KCTD20Q7Z5Y7 419 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 MDP1Q86V88 176 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 CLVS1Q8IUQ0 354 aaPredicted RBP12.34□□□□□ -0.43
CD4-208ENST00000538827 ZNF485Q8NCK3 441 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 OR1F12Q8NHA8 337 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 HSD17B8Q92506 261 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 ISYNA1Q9NPH2 558 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 SLC17A5Q9NRA2 495 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 R4GMQ9 66 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 F8P00451 2351 aa12.34□□□□□ -0.43
CD4-208ENST00000538827 DPPA5A6NC42 116 aa12.33□□□□□ -0.44
CD4-208ENST00000538827 A8MXE2 369 aa12.33□□□□□ -0.44
CD4-208ENST00000538827 F5H5K5 113 aa12.33□□□□□ -0.44
CD4-208ENST00000538827 ANXA2P07355 339 aaKnown RBP12.33□□□□□ -0.44
CD4-208ENST00000538827 CD36P16671 472 aa12.33□□□□□ -0.44
CD4-208ENST00000538827 CELP19835 753 aa12.33□□□□□ -0.44
CD4-208ENST00000538827 TGFBR2P37173 567 aa12.33□□□□□ -0.44
CD4-208ENST00000538827 GDI2P50395 445 aaKnown RBP12.33□□□□□ -0.44
CD4-208ENST00000538827 ASCL1P50553 236 aa12.33□□□□□ -0.44
CD4-208ENST00000538827 PSMA6P60900 246 aaKnown RBP12.33□□□□□ -0.44
CD4-208ENST00000538827 RAB1AP62820 205 aa12.33□□□□□ -0.44
CD4-208ENST00000538827 BDH1Q02338 343 aa12.33□□□□□ -0.44
CD4-208ENST00000538827 PLP2Q04941 152 aa12.33□□□□□ -0.44
CD4-208ENST00000538827 MRPL28Q13084 256 aaKnown RBP12.33□□□□□ -0.44
CD4-208ENST00000538827 CDK5R1Q15078 307 aa12.33□□□□□ -0.44
CD4-208ENST00000538827 SSX1Q16384 188 aa12.33□□□□□ -0.44
CD4-208ENST00000538827 SLC25A35Q3KQZ1 300 aa12.33□□□□□ -0.44
CD4-208ENST00000538827 BCL2L15Q5TBC7 163 aa12.33□□□□□ -0.44
CD4-208ENST00000538827 GPR107Q5VW38 600 aa12.33□□□□□ -0.44
CD4-208ENST00000538827 DEGS2Q6QHC5 323 aa12.33□□□□□ -0.44
CD4-208ENST00000538827 STAC2Q6ZMT1 411 aa12.33□□□□□ -0.44
CD4-208ENST00000538827 DPPA2Q7Z7J5 298 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms