RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 LRP12Q9Y561 859 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ALPK2Q86TB3 2170 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 A0A1W2PR80 420 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 OR6C6A6NF89 314 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 A8MXE2 369 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 C16orf97H3BN30 126 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 CGAP01215 116 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 TFAP2AP05549 437 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 CD36P16671 472 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 PCMT1P22061 227 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 PSMA1P25786 263 aaKnown RBP9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 CD79BP40259 229 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 CX3CR1P49238 355 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 PSG4Q00888 419 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 GABRA6Q16445 453 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 ODF4Q2M2E3 257 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 SLC25A35Q3KQZ1 300 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 TIMM50Q3ZCQ8 353 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 CCDC58Q4VC31 144 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 C4orf17Q53FE4 359 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 GPR107Q5VW38 600 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 LIPNQ5VXI9 398 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 LIPKQ5VXJ0 399 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 RFLNBQ8N5W9 214 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 OR5AK2Q8NH90 309 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 ST7LQ8TDW4 575 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 RNF133Q8WVZ7 376 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 MAP6Q96JE9 813 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 DMRTA2Q96SC8 542 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 AMELYQ99218 206 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 KCNJ15Q99712 375 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 ACOXLQ9NUZ1 547 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 MRM2Q9UI43 246 aaKnown RBP9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 SSR3Q9UNL2 185 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 GRIP1Q9Y3R0 1128 aa9.33□□□□□ -0.92
TNFRSF1A-211ENST00000538363 LOC100506127A0A0U1RQW1 187 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 TRIM64CA6NLI5 447 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 AGFG2O95081 481 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 SERPINA3P01011 423 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 LCATP04180 440 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 PAX7P23759 505 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 RGS6P49758 472 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 ASCL1P50553 236 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 GTF2A1P52655 376 aaPredicted RBP9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 BDH1Q02338 343 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 ROM1Q03395 351 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 ALKBH1Q13686 389 aaKnown RBP9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 TRAM1Q15629 374 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 PCK2Q16822 640 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 TBC1D28Q2M2D7 210 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 GFOD2Q3B7J2 385 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 CCDC92Q53HC0 331 aaPredicted RBP9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 SYT6Q5T7P8 510 aaPredicted RBP9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 XAF1Q6GPH4 301 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 ZNF474Q6S9Z5 364 aaPredicted RBP9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 UNQ6126/PRO20091Q6UXV3 157 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 FAM57BQ71RH2 274 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 MDP1Q86V88 176 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 GABRG1Q8N1C3 465 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 C17orf78Q8N4C9 275 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 TMEM203Q969S6 136 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 TMIGD2Q96BF3 282 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 PELI1Q96FA3 418 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 COQ7Q99807 217 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 TMED9Q9BVK6 235 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 ACTR6Q9GZN1 396 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 MOV10Q9HCE1 1003 aaKnown RBP9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 OBP2BQ9NPH6 170 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 SLC17A5Q9NRA2 495 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 OR52A1Q9UKL2 312 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 GSTK1Q9Y2Q3 226 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 R4GMQ9 66 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 BSNQ9UPA5 3926 aa9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 SPENQ96T58 3664 aaKnown RBP9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 FASNP49327 2511 aaKnown RBP9.32□□□□□ -0.92
TNFRSF1A-211ENST00000538363 A0A1B0GVI7 797 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 SMIM31A0A1B0GVY4 71 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 C5orf49A4QMS7 147 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 DPPA5A6NC42 116 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 OR5H1A6NKK0 313 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 M0R135 149 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 M0R1B8 84 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 CASKO14936 926 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 AIREO43918 545 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 ADRA2AP08913 450 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 CPEP16870 476 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 STOMP27105 288 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 APEX1P27695 318 aaKnown RBP9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 OPRL1P41146 370 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 UQCRFS1P47985 274 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 ALDH3B2P48448 385 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 TGM4P49221 684 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 IDH3GP51553 393 aaPredicted RBP9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 GP2P55259 537 aaKnown RBP9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 FAM27E3Q08E93 113 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 MALLQ13021 153 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 GPR50Q13585 617 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 PPA1Q15181 289 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 ZNF704Q6ZNC4 412 aaPredicted RBP9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 RHOUQ7L0Q8 258 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms