RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 ACOD1A6NK06 481 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 ZNF879B4DU55 563 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 CDX4O14627 284 aaPredicted RBP9.58□□□□□ -0.88
CLIP1-210ENST00000538120 ARL6IP5O75915 188 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 P2RY4P51582 365 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 RAB14P61106 215 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 RPS18P62269 152 aaKnown RBP9.58□□□□□ -0.88
CLIP1-210ENST00000538120 RPS15P62841 145 aaKnown RBP9.58□□□□□ -0.88
CLIP1-210ENST00000538120 MYBPHQ13203 477 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 OPCMLQ14982 345 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 MEP1BQ16820 701 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 SFRP5Q5T4F7 317 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 DCAF12Q5T6F0 453 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 SLC22A10Q63ZE4 541 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 SLC25A25Q6KCM7 469 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 NDUFAF7Q7L592 441 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 PPP1R32Q7Z5V6 425 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 CXorf58Q96LI9 332 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 SPRY4Q9C004 299 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 ALKBH4Q9NXW9 302 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 PIPOXQ9P0Z9 390 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 ABRACLQ9P1F3 81 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 B3GAT1Q9P2W7 334 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 COA3Q9Y2R0 106 aaPredicted RBP9.58□□□□□ -0.88
CLIP1-210ENST00000538120 KCNMB2Q9Y691 235 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 TMEM14AQ9Y6G1 99 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 ALPK2Q86TB3 2170 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 NSG1A0A0A6YYJ2 146 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 IGKV1D-43A0A0B4J1Z2 117 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 A0A1W2PNU3 283 aaPredicted RBP9.58□□□□□ -0.88
CLIP1-210ENST00000538120 NPIPB13A6NJU9 1138 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 OR4C45A6NMZ5 311 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 NPIPB4C9JG80 1138 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 TP53I11O14683 189 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 TSPAN9O75954 239 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 MPZL1O95297 269 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 HOXD4P09016 255 aaPredicted RBP9.58□□□□□ -0.88
CLIP1-210ENST00000538120 RAG2P55895 527 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 HSF1Q00613 529 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 TLE3Q04726 772 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 DYRK1AQ13627 763 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 HSD17B12Q53GQ0 312 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 TMEM81Q6P7N7 255 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 SLC35D2Q76EJ3 337 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 FAM220AQ7Z4H9 259 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 PRSS35Q8N3Z0 413 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 OR2G2Q8NGZ5 317 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 PHYHIPQ92561 330 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 ELMOD3Q96FG2 381 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 SGCZQ96LD1 299 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 OR8B4Q96RC9 309 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 MS4A7Q9GZW8 240 aaPredicted RBP9.58□□□□□ -0.88
CLIP1-210ENST00000538120 WNT5BQ9H1J7 359 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 MED29Q9NX70 200 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 MGAT4CQ9UBM8 478 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 IKZF2Q9UKS7 526 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 R4GN57 208 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 BDP1A6H8Y1 2624 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 KIF26BQ2KJY2 2108 aa9.58□□□□□ -0.88
CLIP1-210ENST00000538120 TRBV5-5A0A0J9YX44 114 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 A6NIZ1 184 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 GSTZ1O43708 216 aaPredicted RBP9.57□□□□□ -0.88
CLIP1-210ENST00000538120 WNT11O96014 354 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 HLA-DQA2P01906 255 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 CCL3P10147 92 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 SRMP19623 302 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 ANXA7P20073 488 aaKnown RBP9.57□□□□□ -0.88
CLIP1-210ENST00000538120 PSMB1P20618 241 aaKnown RBP9.57□□□□□ -0.88
CLIP1-210ENST00000538120 MLF1P58340 268 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 RAP1BP61224 184 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 RAP1AP62834 184 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 POU3F1Q03052 451 aaPredicted RBP9.57□□□□□ -0.88
CLIP1-210ENST00000538120 FMODQ06828 376 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 Q0VFX4 171 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 BTN1A1Q13410 526 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 CCDC157Q569K6 752 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 OPN5Q6U736 354 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.57□□□□□ -0.88
CLIP1-210ENST00000538120 ARMC10Q8N2F6 343 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 ZNF248Q8NDW4 579 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 SLC25A38Q96DW6 304 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 ANGPTL4Q9BY76 406 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 REG4Q9BYZ8 158 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 NCOR1P1Q9H4R4 102 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 TMEM185BQ9H7F4 350 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 CRLF2Q9HC73 371 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 SERINC1Q9NRX5 453 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 KLHL13Q9P2N7 655 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 PADI1Q9ULC6 663 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 B3GALT5Q9Y2C3 310 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 A0A1W2PNV4 684 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 ANKRD61A6NGH8 418 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 ZNF814B7Z6K7 855 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 NPIPA5E9PKD4 350 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 PHYHO14832 338 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 PF4V1P10720 104 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 CRABP1P29762 137 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 KIR3DL2P43630 455 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 DAP3P51398 398 aaKnown RBP9.57□□□□□ -0.88
CLIP1-210ENST00000538120 SLC17A1Q14916 467 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms