RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 HSF1Q00613 529 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 BAMBIQ13145 260 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 DHRS2Q13268 280 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 UBXN2BQ14CS0 331 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 NKPD1Q17RQ9 610 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 KIF26BQ2KJY2 2108 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 DEGS2Q6QHC5 323 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 COX15Q7KZN9 410 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 BEST3Q8N1M1 668 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 OR6K3Q8NGY3 331 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 PTX4Q96A99 478 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 C5orf34Q96MH7 638 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 EDEM2Q9BV94 578 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 MYOZ1Q9NP98 299 aaPredicted RBP12.78□□□□□ -0.36
USP44-203ENST00000537435 SLC22A11Q9NSA0 550 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 ZNF107Q9UII5 783 aaPredicted RBP12.78□□□□□ -0.36
USP44-203ENST00000537435 WIPF3A6NGB9 483 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 NAGAP17050 411 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 NUP62P37198 522 aaPredicted RBP12.78□□□□□ -0.36
USP44-203ENST00000537435 C17orf67Q0P5P2 114 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 TUSC1Q2TAM9 212 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 ZNF260Q3ZCT1 412 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 PXDC1Q5TGL8 231 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 SLC51BQ86UW2 128 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 CD163Q86VB7 1156 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 APCDD1LQ8NCL9 501 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 CADM4Q8NFZ8 388 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 STT3BQ8TCJ2 826 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 RNF133Q8WVZ7 376 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 AQP3Q92482 292 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 EDAQ92838 391 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 FOXRED1Q96CU9 486 aaPredicted RBP12.78□□□□□ -0.36
USP44-203ENST00000537435 EMC6Q9BV81 110 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 PPA2Q9H2U2 334 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 CHST11Q9NPF2 352 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 CA14Q9ULX7 337 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 METTL21EPA6NDL7 271 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 SHISA8B8ZZ34 492 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 H3BML4 177 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 RAB27BO00194 218 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 HOXD4P09016 255 aaPredicted RBP12.77□□□□□ -0.37
USP44-203ENST00000537435 LIPCP11150 499 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 SRFP11831 508 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 RAB6AP20340 208 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 CD34P28906 385 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 BDKRB2P30411 391 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 GNALP38405 381 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 APOBEC1P41238 236 aaKnown RBP12.77□□□□□ -0.37
USP44-203ENST00000537435 MMP16P51512 607 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 FOXF1Q12946 379 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 CLVS2Q5SYC1 327 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 ZNF546Q86UE3 836 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 FJX1Q86VR8 437 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 OR52N4Q8NGI2 321 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 OR5M9Q8NGP3 310 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 OR1S1Q8NH92 325 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 C11orf40Q8WZ69 217 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 CMBLQ96DG6 245 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 FAM206AQ9NX38 181 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 SEMA5BQ9P283 1151 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 RAB22AQ9UL26 194 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 NOP16Q9Y3C1 178 aaKnown RBP12.77□□□□□ -0.37
USP44-203ENST00000537435 DISC1C4P0D8 188 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 LGALS8O00214 317 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 TTRP02766 147 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 RLN2P04090 185 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 CDNFQ49AH0 187 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 ZNF813Q6ZN06 617 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 PDZD9Q8IXQ8 264 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 PAQR4Q8N4S7 273 aaPredicted RBP12.77□□□□□ -0.37
USP44-203ENST00000537435 OR10H5Q8NGA6 315 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 OR5M8Q8NGP6 311 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 DDIT4LQ96D03 193 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 SLAMF6Q96DU3 332 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 SLC7A5P2Q9GIP4 190 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 VSIG4Q9Y279 399 aa12.77□□□□□ -0.37
USP44-203ENST00000537435 PRUNE2Q8WUY3 3088 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 SPAG17Q6Q759 2223 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 FER1L5A0AVI2 2057 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 MYO15AQ9UKN7 3530 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 UNC13CQ8NB66 2214 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 A0A1B0GTI1 187 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 A8MXK9 166 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 HLA-AP01891 365 aaKnown RBP12.76□□□□□ -0.37
USP44-203ENST00000537435 GLB1P16278 677 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 BIDP55957 195 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 TAGLNQ01995 201 aaKnown RBP12.76□□□□□ -0.37
USP44-203ENST00000537435 RNASE10Q5GAN6 216 aaKnown RBP12.76□□□□□ -0.37
USP44-203ENST00000537435 PHF19Q5T6S3 580 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 RAB12Q6IQ22 244 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 OVCH2Q7RTZ1 564 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 TRAPPC6BQ86SZ2 158 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 GVQW1Q8N7I0 195 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 CHST4Q8NCG5 386 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 FAM46BQ96A09 425 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 NUDT22Q9BRQ3 303 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 CHRDQ9H2X0 955 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 HRH3Q9Y5N1 445 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 LAMA1P25391 3075 aa12.76□□□□□ -0.37
USP44-203ENST00000537435 LOC100509620A0A075B734 347 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms