RNA–Protein interactions for RNA: ENST00000536515.5

LGR5-202, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-202ENST00000536515 CTSFQ9UBX1 484 aa11.7□□□□□ -0.54
LGR5-202ENST00000536515 NPIPA1Q9UND3 350 aa11.7□□□□□ -0.54
LGR5-202ENST00000536515 NOP16Q9Y3C1 178 aaKnown RBP11.7□□□□□ -0.54
LGR5-202ENST00000536515 WIPF3A6NGB9 483 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 LMO7DNF2Z398 122 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 ADAM10O14672 748 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 FGF2P09038 288 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 STARD6P59095 220 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 POU3F1Q03052 451 aaPredicted RBP11.69□□□□□ -0.54
LGR5-202ENST00000536515 CFHR1Q03591 330 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 LRRC37A5PQ49AS3 106 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 PAPD4Q6PIY7 484 aaKnown RBP11.69□□□□□ -0.54
LGR5-202ENST00000536515 SYT13Q7L8C5 426 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.69□□□□□ -0.54
LGR5-202ENST00000536515 BVESQ8NE79 360 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 ASB10Q8WXI3 467 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 FAM46BQ96A09 425 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 FGGYQ96C11 551 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 SHDQ96IW2 340 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 DUSP15Q9H1R2 295 aaPredicted RBP11.69□□□□□ -0.54
LGR5-202ENST00000536515 GPR160Q9UJ42 338 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 GDF2Q9UK05 429 aaPredicted RBP11.69□□□□□ -0.54
LGR5-202ENST00000536515 ABCA7Q8IZY2 2146 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 CABIN1Q9Y6J0 2220 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 OR5H14A6NHG9 310 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 KRBOX1C9JBD0 128 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 HLA-AP01891 365 aaKnown RBP11.69□□□□□ -0.54
LGR5-202ENST00000536515 CD74P04233 296 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 ISG15P05161 165 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 H2BFMP0C1H6 154 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 MYF5P13349 255 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 CD34P28906 385 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 CDNFQ49AH0 187 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 C1orf100Q5SVJ3 147 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 ZNF704Q6ZNC4 412 aaPredicted RBP11.69□□□□□ -0.54
LGR5-202ENST00000536515 CHST4Q8NCG5 386 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 ST8SIA4Q92187 359 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 SEC22AQ96IW7 307 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 RAB33BQ9H082 229 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 SHARPINQ9H0F6 387 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 CNTD2Q9H8S5 307 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 VDAC3Q9Y277 283 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 VSIG4Q9Y279 399 aa11.69□□□□□ -0.54
LGR5-202ENST00000536515 A6NIZ1 184 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 CDK2AP1O14519 115 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 GNALP38405 381 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 FBXW4P57775 412 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 RAP1BP61224 184 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 RAP1AP62834 184 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 CXADRP78310 365 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 SLC22A6Q4U2R8 563 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 FAM74A1Q5RGS3 127 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 CLVS2Q5SYC1 327 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 TMEM244Q5VVB8 128 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 LIN54Q6MZP7 749 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 C3orf33Q6P1S2 294 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 FJX1Q86VR8 437 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 LYPD6Q86Y78 171 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 GVQW1Q8N7I0 195 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 OR5M8Q8NGP6 311 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 ASB13Q8WXK3 278 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 PDCD10Q9BUL8 212 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 EDEM2Q9BV94 578 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 SUSD2Q9UGT4 822 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 CA14Q9ULX7 337 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 MRPS17Q9Y2R5 130 aaKnown RBP11.68□□□□□ -0.54
LGR5-202ENST00000536515 COL6A3P12111 3177 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 COL5A1P20908 1838 aaPredicted RBP11.68□□□□□ -0.54
LGR5-202ENST00000536515 IGHV1OR21-1A0A087WYE8 117 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 A0A0A6YYH2 397 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 A0A1B0GTI1 187 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 LOC390937A0A1W2PQ73 354 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 A6NJ64 397 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 METTL12A8MUP2 240 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 SHISA8B8ZZ34 492 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 ZNF354AO60765 605 aaPredicted RBP11.68□□□□□ -0.54
LGR5-202ENST00000536515 ATXN7L3Q14CW9 347 aaPredicted RBP11.68□□□□□ -0.54
LGR5-202ENST00000536515 RNASE10Q5GAN6 216 aaKnown RBP11.68□□□□□ -0.54
LGR5-202ENST00000536515 OR52W1Q6IF63 320 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 OGFOD3Q6PK18 319 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 DNM1P34Q6PK57 102 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 TRAPPC6BQ86SZ2 158 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 OR52N4Q8NGI2 321 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 TMEM234Q8WY98 164 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 ST8SIA2Q92186 375 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 KCNK17Q96T54 332 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 EMC6Q9BV81 110 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 WDR13Q9H1Z4 485 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 TMEM185BQ9H7F4 350 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 ATXN7L1Q9ULK2 861 aaPredicted RBP11.68□□□□□ -0.54
LGR5-202ENST00000536515 RHBDD3Q9Y3P4 386 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 WDR87Q6ZQQ6 2873 aa11.68□□□□□ -0.54
LGR5-202ENST00000536515 DISC1C4P0D8 188 aa11.67□□□□□ -0.54
LGR5-202ENST00000536515 D6RAR5 112 aa11.67□□□□□ -0.54
LGR5-202ENST00000536515 RAB27BO00194 218 aa11.67□□□□□ -0.54
LGR5-202ENST00000536515 HPP00738 406 aa11.67□□□□□ -0.54
LGR5-202ENST00000536515 NAGAP17050 411 aa11.67□□□□□ -0.54
LGR5-202ENST00000536515 HNRNPKP61978 463 aaKnown RBP eCLIP11.67□□□□□ -0.542e-8■■■■■ 28.6
LGR5-202ENST00000536515 RNF4P78317 190 aa11.67□□□□□ -0.54
LGR5-202ENST00000536515 HSF1Q00613 529 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms