RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 PTHP01270 115 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 SRD5A1P18405 259 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 PRKACGP22612 351 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 ELF3P78545 371 aaPredicted RBP8.13□□□□□ -1.11
SSBP3-215ENST00000533946 CRMP1Q14194 572 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 SNAI3Q3KNW1 292 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 GPR139Q6DWJ6 353 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 LCN8Q6JVE9 175 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 C16orf89Q6UX73 402 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 ZBTB46Q86UZ6 589 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 AQP11Q8NBQ7 271 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 SLC37A3Q8NCC5 494 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 CCDC197Q8NCU1 140 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 OR2Z1Q8NG97 314 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 GNPDA2Q8TDQ7 276 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 TAF15Q92804 592 aaKnown RBP eCLIP8.13□□□□□ -1.116e-7■■■■□ 20.6
SSBP3-215ENST00000533946 SLCO4A1Q96BD0 722 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 SLC7A6OSQ96CW6 309 aaPredicted RBP8.13□□□□□ -1.11
SSBP3-215ENST00000533946 THTPAQ9BU02 230 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 C1orf198Q9H425 327 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 ZNF665Q9H7R5 613 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 SAP30LQ9HAJ7 183 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 G6PC2Q9NQR9 355 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 MMP26Q9NRE1 261 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 TMEM160Q9NX00 188 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 SLCO1C1Q9NYB5 712 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 STX18Q9P2W9 335 aaKnown RBP8.13□□□□□ -1.11
SSBP3-215ENST00000533946 EIF3KQ9UBQ5 218 aaKnown RBP8.13□□□□□ -1.11
SSBP3-215ENST00000533946 F5H5K5 113 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 F5H5P2 479 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 TRAPPC2LH3BP13 241 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 ARPC3O15145 178 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 FCN3O75636 299 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 VENTXO95231 258 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 CYB5R3P00387 301 aaPredicted RBP8.12□□□□□ -1.11
SSBP3-215ENST00000533946 IGHV2-5P01817 119 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 ACSM4P0C7M7 580 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 SLC2A1P11166 492 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 GCH1P30793 250 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 SLC6A6P31641 620 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 RPS6KA3P51812 740 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 TMEM33P57088 247 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 PCBD1P61457 104 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 LSM6P62312 80 aaKnown RBP8.12□□□□□ -1.11
SSBP3-215ENST00000533946 LCN2P80188 198 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 TNFAIP6P98066 277 aaPredicted RBP8.12□□□□□ -1.11
SSBP3-215ENST00000533946 SCRN3Q0VDG4 424 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 COX10Q12887 443 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 AQP6Q13520 282 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 TRIM25Q14258 630 aaKnown RBP8.12□□□□□ -1.11
SSBP3-215ENST00000533946 ZMYND11Q15326 602 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 ACSM5Q6NUN0 579 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 SYT9Q86SS6 491 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 DHFR2Q86XF0 187 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 ALDH16A1Q8IZ83 802 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 ZNF540Q8NDQ6 660 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 OR2AE1Q8NHA4 323 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 SNX33Q8WV41 574 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 CANT1Q8WVQ1 401 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 MCUR1Q96AQ8 359 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 HAVCR1Q96D42 359 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 RBM4Q9BWF3 364 aaKnown RBP8.12□□□□□ -1.11
SSBP3-215ENST00000533946 TSSK6Q9BXA6 273 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 C1QTNF5Q9BXJ0 243 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 TMPRSS13Q9BYE2 586 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 LRMDAQ9H2I8 198 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 DECR2Q9NUI1 292 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 TBCCD1Q9NVR7 557 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 NKIRAS2Q9NYR9 191 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 UBAP1Q9NZ09 502 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 OPN4Q9UHM6 478 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 CYB5R1Q9UHQ9 305 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 CDH10Q9Y6N8 788 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 PKD1L1Q8TDX9 2849 aa8.12□□□□□ -1.11
SSBP3-215ENST00000533946 AHCYL1O43865 530 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 GMNNO75496 209 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 IGHV2-70P01814 119 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 ERCC1P07992 297 aaPredicted RBP8.11□□□□□ -1.11
SSBP3-215ENST00000533946 MSMBP08118 114 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 SBK2P0C263 348 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 COX5BP10606 129 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 ITGA2P17301 1181 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 KITLGP21583 273 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 HCCSP53701 268 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 DVL1P1P54792 670 aaPredicted RBP8.11□□□□□ -1.11
SSBP3-215ENST00000533946 MRPS11P82912 194 aaKnown RBP8.11□□□□□ -1.11
SSBP3-215ENST00000533946 GK2Q14410 553 aaPredicted RBP8.11□□□□□ -1.11
SSBP3-215ENST00000533946 MTX3Q5HYI7 312 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 LINC01590Q5TEZ4 76 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 TMEM236Q5W0B7 351 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 OR2T5Q6IEZ7 315 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 FAHD2BQ6P2I3 314 aaPredicted RBP8.11□□□□□ -1.11
SSBP3-215ENST00000533946 PGM2L1Q6PCE3 622 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 COLCA1Q6ZS62 124 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 ADCK1Q86TW2 530 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 JAZF1Q86VZ6 243 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 BBS1Q8NFJ9 593 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 OR2T29Q8NH02 315 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 FNDC8Q8TC99 324 aa8.11□□□□□ -1.11
SSBP3-215ENST00000533946 C22orf15Q8WYQ4 148 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms