RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 RNASE13Q5GAN3 156 aaKnown RBP1.22□□□□□ -2.21
BRCA2-205ENST00000533776 SOHLH1Q5JUK2 328 aa1.22□□□□□ -2.21
BRCA2-205ENST00000533776 SPIN3Q5JUX0 258 aa1.22□□□□□ -2.21
BRCA2-205ENST00000533776 PPM1LQ5SGD2 360 aa1.22□□□□□ -2.21
BRCA2-205ENST00000533776 TMEM107Q6UX40 140 aa1.22□□□□□ -2.21
BRCA2-205ENST00000533776 MBOAT1Q6ZNC8 495 aa1.22□□□□□ -2.21
BRCA2-205ENST00000533776 TMEM150AQ86TG1 271 aa1.22□□□□□ -2.21
BRCA2-205ENST00000533776 NKAIN4Q8IVV8 208 aa1.22□□□□□ -2.21
BRCA2-205ENST00000533776 CNPY4Q8N129 248 aa1.22□□□□□ -2.21
BRCA2-205ENST00000533776 NECAB1Q8N987 351 aa1.22□□□□□ -2.21
BRCA2-205ENST00000533776 ST20-AS1Q8NBB2 130 aa1.22□□□□□ -2.21
BRCA2-205ENST00000533776 TTLQ8NG68 377 aa1.22□□□□□ -2.21
BRCA2-205ENST00000533776 OR9K2Q8NGE7 335 aa1.22□□□□□ -2.21
BRCA2-205ENST00000533776 EEF1AKMT3Q96AZ1 226 aa1.22□□□□□ -2.21
BRCA2-205ENST00000533776 DNAJC1Q96KC8 554 aaKnown RBP1.22□□□□□ -2.21
BRCA2-205ENST00000533776 RBBP8Q99708 897 aa1.22□□□□□ -2.21
BRCA2-205ENST00000533776 GGTLC1Q9BX51 225 aa1.22□□□□□ -2.21
BRCA2-205ENST00000533776 OR51M1Q9H341 326 aa1.22□□□□□ -2.21
BRCA2-205ENST00000533776 SLC2A8Q9NY64 477 aa1.22□□□□□ -2.21
BRCA2-205ENST00000533776 DHCR7Q9UBM7 475 aaKnown RBP1.22□□□□□ -2.21
BRCA2-205ENST00000533776 CBY1Q9Y3M2 126 aa1.22□□□□□ -2.21
BRCA2-205ENST00000533776 SDK2Q58EX2 2172 aa1.22□□□□□ -2.21
BRCA2-205ENST00000533776 SHANK1Q9Y566 2161 aa1.22□□□□□ -2.21
BRCA2-205ENST00000533776 AHDC1Q5TGY3 1603 aaPredicted RBP1.22□□□□□ -2.21
BRCA2-205ENST00000533776 ZNF98A6NK75 572 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 GABRR3A8MPY1 467 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 BTNL10A8MVZ5 291 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 NDUFC2-KCTD14E9PQ53 114 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 H7C417 338 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 AIM2O14862 343 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 H6PDO95479 791 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 CTSLP07711 333 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 SLC2A3P11169 496 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 ERGP11308 486 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 ZNF24P17028 368 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 COL8A2P25067 703 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 CALRP27797 417 aaKnown RBP1.21□□□□□ -2.22
BRCA2-205ENST00000533776 PBLDP30039 288 aaPredicted RBP1.21□□□□□ -2.22
BRCA2-205ENST00000533776 FOXN2P32314 431 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 TGFBR1P36897 503 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 GDI2P50395 445 aaKnown RBP1.21□□□□□ -2.22
BRCA2-205ENST00000533776 ACLYP53396 1101 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 RBX1P62877 108 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 CCNA1P78396 465 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 FUT5Q11128 374 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 BAMBIQ13145 260 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 ADNP2Q6IQ32 1131 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 ZYG11AQ6WRX3 759 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 TMEM104Q8NE00 496 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 KCNG3Q8TAE7 436 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 FBXO32Q969P5 355 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 TMEM230Q96A57 120 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 RSG1Q9BU20 258 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 LHX5Q9H2C1 402 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 DHX35Q9H5Z1 703 aaKnown RBP1.21□□□□□ -2.22
BRCA2-205ENST00000533776 METTL7AQ9H8H3 244 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 EXOSC4Q9NPD3 245 aaKnown RBP1.21□□□□□ -2.22
BRCA2-205ENST00000533776 HRASLS2Q9NWW9 162 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 ZNF586Q9NXT0 402 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 C21orf62Q9NYP8 219 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 UXTQ9UBK9 157 aaPredicted RBP1.21□□□□□ -2.22
BRCA2-205ENST00000533776 MTFP1Q9UDX5 166 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 CARHSP1Q9Y2V2 147 aaKnown RBP1.21□□□□□ -2.22
BRCA2-205ENST00000533776 NID2Q14112 1375 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 PALLDQ8WX93 1383 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 USP47Q96K76 1375 aa1.21□□□□□ -2.22
BRCA2-205ENST00000533776 ANKRD12Q6UB98 2062 aa1.2□□□□□ -2.22
BRCA2-205ENST00000533776 TRAV6A0A075B6T7 132 aa1.2□□□□□ -2.22
BRCA2-205ENST00000533776 IGHV3OR16-8A0A075B7F1 116 aa1.2□□□□□ -2.22
BRCA2-205ENST00000533776 IGKV1-8A0A0C4DH67 115 aa1.2□□□□□ -2.22
BRCA2-205ENST00000533776 IGKV2-24A0A0C4DH68 120 aa1.2□□□□□ -2.22
BRCA2-205ENST00000533776 TMEM120BA0PK00 339 aa1.2□□□□□ -2.22
BRCA2-205ENST00000533776 XKRY2A2RUG3 117 aa1.2□□□□□ -2.22
BRCA2-205ENST00000533776 CDC40O60508 579 aaKnown RBP eCLIP1.2□□□□□ -2.22
BRCA2-205ENST00000533776 SEMA3DO95025 777 aa1.2□□□□□ -2.22
BRCA2-205ENST00000533776 ARG1P05089 322 aa1.2□□□□□ -2.22
BRCA2-205ENST00000533776 U2AF2P26368 475 aaKnown RBP eCLIP1.2□□□□□ -2.22
BRCA2-205ENST00000533776 SYNJ2BPP57105 145 aa1.2□□□□□ -2.22
BRCA2-205ENST00000533776 STXBP1P61764 594 aaKnown RBP1.2□□□□□ -2.22
BRCA2-205ENST00000533776 RPS23P62266 143 aaKnown RBP1.2□□□□□ -2.22
BRCA2-205ENST00000533776 RPL23P62829 140 aaKnown RBP1.2□□□□□ -2.22
BRCA2-205ENST00000533776 CYP24A1Q07973 514 aa1.2□□□□□ -2.22
BRCA2-205ENST00000533776 ZNF266Q14584 549 aa1.2□□□□□ -2.22
BRCA2-205ENST00000533776 RBMY1FQ15415 496 aaKnown RBP1.2□□□□□ -2.22
BRCA2-205ENST00000533776 PPP1R7Q15435 360 aa1.2□□□□□ -2.22
BRCA2-205ENST00000533776 TAF9Q16594 264 aa1.2□□□□□ -2.22
BRCA2-205ENST00000533776 SLC8B1Q6J4K2 584 aa1.2□□□□□ -2.22
BRCA2-205ENST00000533776 SPINT4Q6UDR6 99 aa1.2□□□□□ -2.22
BRCA2-205ENST00000533776 C12orf54Q6X4T0 127 aa1.2□□□□□ -2.22
BRCA2-205ENST00000533776 MRPL55Q7Z7F7 128 aaKnown RBP1.2□□□□□ -2.22
BRCA2-205ENST00000533776 CDR2LQ86X02 465 aaPredicted RBP1.2□□□□□ -2.22
BRCA2-205ENST00000533776 NPWQ8N729 165 aa1.2□□□□□ -2.22
BRCA2-205ENST00000533776 CHST4Q8NCG5 386 aa1.2□□□□□ -2.22
BRCA2-205ENST00000533776 OR11H7Q8NGC8 314 aa1.2□□□□□ -2.22
BRCA2-205ENST00000533776 OR5M1Q8NGP8 315 aa1.2□□□□□ -2.22
BRCA2-205ENST00000533776 OR13C2Q8NGS9 318 aa1.2□□□□□ -2.22
BRCA2-205ENST00000533776 DCPSQ96C86 337 aaKnown RBP1.2□□□□□ -2.22
BRCA2-205ENST00000533776 ECHDC3Q96DC8 303 aa1.2□□□□□ -2.22
BRCA2-205ENST00000533776 LGALS13Q9UHV8 139 aa1.2□□□□□ -2.22
BRCA2-205ENST00000533776 ZNF391Q9UJN7 358 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms