RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 PPP1CBP62140 327 aa1.25□□□□□ -2.21
ATM-220ENST00000533526 CDK5Q00535 292 aa1.25□□□□□ -2.21
ATM-220ENST00000533526 RNASE13Q5GAN3 156 aaKnown RBP1.25□□□□□ -2.21
ATM-220ENST00000533526 SPIN3Q5JUX0 258 aa1.25□□□□□ -2.21
ATM-220ENST00000533526 GPR107Q5VW38 600 aa1.25□□□□□ -2.21
ATM-220ENST00000533526 RNASEKQ6P5S7 137 aaKnown RBP1.25□□□□□ -2.21
ATM-220ENST00000533526 CASP12Q6UXS9 341 aa1.25□□□□□ -2.21
ATM-220ENST00000533526 NPSR1Q6W5P4 371 aa1.25□□□□□ -2.21
ATM-220ENST00000533526 NIPA1Q7RTP0 329 aa1.25□□□□□ -2.21
ATM-220ENST00000533526 NANOGNBQ7Z5D8 188 aa1.25□□□□□ -2.21
ATM-220ENST00000533526 CDR2LQ86X02 465 aaPredicted RBP1.25□□□□□ -2.21
ATM-220ENST00000533526 NPWQ8N729 165 aa1.25□□□□□ -2.21
ATM-220ENST00000533526 PRELID2Q8N945 189 aa1.25□□□□□ -2.21
ATM-220ENST00000533526 CHST4Q8NCG5 386 aa1.25□□□□□ -2.21
ATM-220ENST00000533526 OR9K2Q8NGE7 335 aa1.25□□□□□ -2.21
ATM-220ENST00000533526 RAB3IL1Q8TBN0 382 aa1.25□□□□□ -2.21
ATM-220ENST00000533526 RSPH1Q8WYR4 309 aa1.25□□□□□ -2.21
ATM-220ENST00000533526 RBBP8Q99708 897 aa1.25□□□□□ -2.21
ATM-220ENST00000533526 GCOM2Q9BZD3 368 aaPredicted RBP1.25□□□□□ -2.21
ATM-220ENST00000533526 RACGAP1Q9H0H5 632 aa1.25□□□□□ -2.21
ATM-220ENST00000533526 LHX5Q9H2C1 402 aa1.25□□□□□ -2.21
ATM-220ENST00000533526 EDA2RQ9HAV5 297 aa1.25□□□□□ -2.21
ATM-220ENST00000533526 HRASLS2Q9NWW9 162 aa1.25□□□□□ -2.21
ATM-220ENST00000533526 RHBDL2Q9NX52 303 aa1.25□□□□□ -2.21
ATM-220ENST00000533526 CSDC2Q9Y534 153 aaKnown RBP1.25□□□□□ -2.21
ATM-220ENST00000533526 MUC19Q7Z5P9 8384 aa1.25□□□□□ -2.21
ATM-220ENST00000533526 COL5A1P20908 1838 aaPredicted RBP1.24□□□□□ -2.21
ATM-220ENST00000533526 TMEM120BA0PK00 339 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 VGLL3A8MV65 326 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 C16orf90A8MZG2 172 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 H0Y8G0 127 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 SMKR1H3BMG3 65 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 L7N2F9 121 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 FKBP6O75344 327 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 IGHV3-11P01762 117 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 GGT1P19440 569 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 COL8A2P25067 703 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 RBM34P42696 430 aaKnown RBP1.24□□□□□ -2.21
ATM-220ENST00000533526 SULT1E1P49888 294 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 GDI2P50395 445 aaKnown RBP1.24□□□□□ -2.21
ATM-220ENST00000533526 RPS11P62280 158 aaKnown RBP eCLIP1.24□□□□□ -2.21
ATM-220ENST00000533526 TGM3Q08188 693 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 SRSF5Q13243 272 aaKnown RBP1.24□□□□□ -2.21
ATM-220ENST00000533526 IL15RAQ13261 267 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 PGGHGQ32M88 737 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 TEX30Q5JUR7 227 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 SASS6Q6UVJ0 657 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 Q6ZSR3 168 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 TBC1D21Q8IYX1 336 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 CBR4Q8N4T8 237 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 SLC35G3Q8N808 338 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 ZNF680Q8NEM1 530 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 C1orf64Q8NEQ6 169 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 OR11H7Q8NGC8 314 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 OR56B2PQ8NGI1 322 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 KLF14Q8TD94 323 aaPredicted RBP1.24□□□□□ -2.21
ATM-220ENST00000533526 SLC2A14Q8TDB8 520 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 LRRC29Q8WV35 223 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 DUS3LQ96G46 650 aaKnown RBP1.24□□□□□ -2.21
ATM-220ENST00000533526 IP6K3Q96PC2 410 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 CHCHD7Q9BUK0 85 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 C1orf50Q9BV19 199 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 GGTLC1Q9BX51 225 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 PLA2G12AQ9BZM1 189 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 OR51M1Q9H341 326 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 C21orf62Q9NYP8 219 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 ATAD2BQ9ULI0 1458 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 HMCN1Q96RW7 5635 aa1.24□□□□□ -2.21
ATM-220ENST00000533526 FHOD3Q2V2M9 1422 aa1.23□□□□□ -2.21
ATM-220ENST00000533526 IGHV1-3A0A0C4DH29 117 aa1.23□□□□□ -2.21
ATM-220ENST00000533526 BTNL10A8MVZ5 291 aa1.23□□□□□ -2.21
ATM-220ENST00000533526 KRBOX1C9JBD0 128 aa1.23□□□□□ -2.21
ATM-220ENST00000533526 CLOCKO15516 846 aa1.23□□□□□ -2.21
ATM-220ENST00000533526 PLIN3O60664 434 aa1.23□□□□□ -2.21
ATM-220ENST00000533526 GLSO94925 669 aaPredicted RBP1.23□□□□□ -2.21
ATM-220ENST00000533526 TSPAN13O95857 204 aa1.23□□□□□ -2.21
ATM-220ENST00000533526 IGLV3-25P01717 112 aa1.23□□□□□ -2.21
ATM-220ENST00000533526 EIF4EP06730 217 aaKnown RBP1.23□□□□□ -2.21
ATM-220ENST00000533526 CRYGBP07316 175 aa1.23□□□□□ -2.21
ATM-220ENST00000533526 ACSM4P0C7M7 580 aa1.23□□□□□ -2.21
ATM-220ENST00000533526 P0C880 135 aa1.23□□□□□ -2.21
ATM-220ENST00000533526 CT45A6P0DMU7 189 aa1.23□□□□□ -2.21
ATM-220ENST00000533526 CT45A5P0DMU8 189 aa1.23□□□□□ -2.21
ATM-220ENST00000533526 CT45A7P0DMV0 189 aa1.23□□□□□ -2.21
ATM-220ENST00000533526 TROVE2P10155 538 aaKnown RBP eCLIP1.23□□□□□ -2.21
ATM-220ENST00000533526 U2AF2P26368 475 aaKnown RBP eCLIP1.23□□□□□ -2.21
ATM-220ENST00000533526 MPV17P39210 176 aa1.23□□□□□ -2.21
ATM-220ENST00000533526 SLC1A1P43005 524 aa1.23□□□□□ -2.21
ATM-220ENST00000533526 PRLHRP49683 370 aa1.23□□□□□ -2.21
ATM-220ENST00000533526 ACLYP53396 1101 aa1.23□□□□□ -2.21
ATM-220ENST00000533526 GFERP55789 205 aa1.23□□□□□ -2.21
ATM-220ENST00000533526 KRTAP12-4P60329 112 aa1.23□□□□□ -2.21
ATM-220ENST00000533526 RPS23P62266 143 aaKnown RBP1.23□□□□□ -2.21
ATM-220ENST00000533526 RPL23P62829 140 aaKnown RBP1.23□□□□□ -2.21
ATM-220ENST00000533526 PRR3P79522 188 aaKnown RBP1.23□□□□□ -2.21
ATM-220ENST00000533526 ZNF726P1Q15940 193 aa1.23□□□□□ -2.21
ATM-220ENST00000533526 CT45A1Q5HYN5 189 aa1.23□□□□□ -2.21
ATM-220ENST00000533526 MRPL55Q7Z7F7 128 aaKnown RBP1.23□□□□□ -2.21
ATM-220ENST00000533526 NKAIN4Q8IVV8 208 aa1.23□□□□□ -2.21
ATM-220ENST00000533526 IQCKQ8N0W5 287 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms