RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 GYG2O15488 501 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 SPRY1O43609 319 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 DIRAS1O95057 198 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 STAMBPO95630 424 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 DIRAS3O95661 229 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 WNT11O96014 354 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 PLAUP00749 431 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 TFP02787 698 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 SEMG1P04279 462 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 FABP3P05413 133 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 VPREB1P12018 145 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 AREGP15514 252 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 MAKP20794 623 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 GCSHP23434 173 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 LOXP28300 417 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 SOX6P35712 828 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 GPR4P46093 362 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 CSNK1A1P48729 337 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 DAP3P51398 398 aaKnown RBP5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 IST1P53990 364 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 VLDLRP98155 873 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 PRKCDQ05655 676 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 BSPH1Q075Z2 132 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 DOC2BQ14184 412 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 MELKQ14680 651 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 ACKR1Q16570 336 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 CEACAM16Q2WEN9 425 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 DNAL1Q4LDG9 190 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 ALG10Q5BKT4 473 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 MTX3Q5HYI7 312 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 PHYHD1Q5SRE7 291 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 ADAM5Q6NVV9 412 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 ANKRD16Q6P6B7 361 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 PODNL1Q6PEZ8 512 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 TBPL2Q6SJ96 375 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 NHLRC1Q6VVB1 395 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 MBOAT2Q6ZWT7 520 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 HDDC2Q7Z4H3 204 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 OAFQ86UD1 273 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 DHFR2Q86XF0 187 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 MEX3DQ86XN8 651 aaKnown RBP5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 WDR31Q8NA23 367 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 SETD9Q8NE22 299 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 SLC24A4Q8NFF2 622 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 OR52J3Q8NH60 311 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 OR51A7Q8NH64 312 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 SLC7A13Q8TCU3 470 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 LIPHQ8WWY8 451 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 AKAP1Q92667 903 aaKnown RBP eCLIP5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 POP5Q969H6 163 aaKnown RBP5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 SLAMF9Q96A28 289 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 CCDC124Q96CT7 223 aaKnown RBP5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 SLC25A44Q96H78 314 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 BOD1Q96IK1 185 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 LRR1Q96L50 414 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 SAMD8Q96LT4 415 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 ZNF347Q96SE7 839 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 SEPHS2Q99611 448 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 TMEM204Q9BSN7 226 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 THTPAQ9BU02 230 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 CADM1Q9BY67 442 aaKnown RBP5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 ULBP2Q9BZM5 246 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 NDEL1Q9GZM8 345 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 MOV10Q9HCE1 1003 aaKnown RBP5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 KRCC1Q9NPI7 259 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 INIPQ9NRY2 104 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 NPAP1Q9NZP6 1156 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 POFUT2Q9Y2G5 429 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 INTS1Q8N201 2190 aaKnown RBP5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 ANKHD1Q8IWZ3 2542 aaKnown RBP5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 FBN2P35556 2912 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 CELSR2Q9HCU4 2923 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 CENPEQ02224 2701 aa5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 TRAV27A0A087WT01 109 aa5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 ARPC4-TTLL3A0A0A6YYG9 625 aa5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 TRBV4-1A0A0J9YWV2 114 aa5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 A0A1B0GWJ7 208 aa5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 OR6C68A6NDL8 312 aa5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 ZNF99A8MXY4 864 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 F5H697 171 aa5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 ABCD4O14678 606 aa5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 HS3ST1O14792 307 aa5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 GADD45GO95257 159 aa5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 TGFAP01135 160 aa5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 IGHG1P01857 330 aa5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 KRT8P05787 483 aa5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 TSPAN19P0C672 248 aa5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 B4GALT1P15291 398 aa5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 ACADSP16219 412 aa5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 ATP6V1B2P21281 511 aa5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 PAX7P23759 505 aa5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 RRM2P31350 389 aa5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 RPL4P36578 427 aaKnown RBP5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 PITPNBP48739 271 aa5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 SLC9A3P48764 834 aa5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 CENPAP49450 140 aa5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 ART1P52961 327 aa5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 RPS4XP62701 263 aaKnown RBP5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 TUBA1BP68363 451 aa5.02□□□□□ -1.61
HMGB1P42-201ENST00000532126 TUBA4AP68366 448 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms