RNA–Protein interactions for RNA: ENST00000530075.1

GMDS-206, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-206ENST00000530075 TPD52L3Q96J77 140 aa2.56□□□□□ -2
GMDS-206ENST00000530075 C8orf17Q9NRJ1 99 aa2.56□□□□□ -2
GMDS-206ENST00000530075 MTFP1Q9UDX5 166 aa2.56□□□□□ -2
GMDS-206ENST00000530075 HYOU1Q9Y4L1 999 aa2.56□□□□□ -2
GMDS-206ENST00000530075 A0A1B0GW55 424 aa2.55□□□□□ -2
GMDS-206ENST00000530075 ZNF233A6NK53 670 aa2.55□□□□□ -2
GMDS-206ENST00000530075 LGALS9O00182 355 aa2.55□□□□□ -2
GMDS-206ENST00000530075 MPHOSPH10O00566 681 aaKnown RBP2.55□□□□□ -2
GMDS-206ENST00000530075 RNF13O43567 381 aa2.55□□□□□ -2
GMDS-206ENST00000530075 CLDN11O75508 207 aa2.55□□□□□ -2
GMDS-206ENST00000530075 HLA-DQB1P01920 261 aa2.55□□□□□ -2
GMDS-206ENST00000530075 SERPINE2P07093 398 aa2.55□□□□□ -2
GMDS-206ENST00000530075 PABPC4LP0CB38 370 aaKnown RBP2.55□□□□□ -2
GMDS-206ENST00000530075 DUX4L2P0CJ85 424 aa2.55□□□□□ -2
GMDS-206ENST00000530075 DUX4L3P0CJ86 424 aa2.55□□□□□ -2
GMDS-206ENST00000530075 DUX4L5P0CJ88 424 aa2.55□□□□□ -2
GMDS-206ENST00000530075 DUX4L6P0CJ89 424 aa2.55□□□□□ -2
GMDS-206ENST00000530075 DUX4L7P0CJ90 424 aa2.55□□□□□ -2
GMDS-206ENST00000530075 ATF6P18850 670 aa2.55□□□□□ -2
GMDS-206ENST00000530075 LOXP28300 417 aaPredicted RBP2.55□□□□□ -2
GMDS-206ENST00000530075 STXBP1P61764 594 aaKnown RBP2.55□□□□□ -2
GMDS-206ENST00000530075 IFT88Q13099 833 aa2.55□□□□□ -2
GMDS-206ENST00000530075 PIGHQ14442 188 aaPredicted RBP2.55□□□□□ -2
GMDS-206ENST00000530075 QPRTQ15274 297 aa2.55□□□□□ -2
GMDS-206ENST00000530075 MPV17L2Q567V2 206 aa2.55□□□□□ -2
GMDS-206ENST00000530075 C9orf135Q5VTT2 229 aa2.55□□□□□ -2
GMDS-206ENST00000530075 GTPBP8Q8N3Z3 284 aaPredicted RBP2.55□□□□□ -2
GMDS-206ENST00000530075 COX18Q8N8Q8 333 aa2.55□□□□□ -2
GMDS-206ENST00000530075 NUBPLQ8TB37 319 aa2.55□□□□□ -2
GMDS-206ENST00000530075 MYO15BQ96JP2 1530 aa2.55□□□□□ -2
GMDS-206ENST00000530075 HSD17B10Q99714 261 aaKnown RBP2.55□□□□□ -2
GMDS-206ENST00000530075 NUP58Q9BVL2 599 aa2.55□□□□□ -2
GMDS-206ENST00000530075 DUX4Q9UBX2 424 aa2.55□□□□□ -2
GMDS-206ENST00000530075 ERCC6L2Q5T890 1561 aa2.54□□□□□ -2
GMDS-206ENST00000530075 PALLDQ8WX93 1383 aa2.54□□□□□ -2
GMDS-206ENST00000530075 GOLGA8OA6NCC3 632 aa2.54□□□□□ -2
GMDS-206ENST00000530075 OR2AG2A6NM03 316 aa2.54□□□□□ -2
GMDS-206ENST00000530075 NCBP2LA6PVI3 153 aaKnown RBP2.54□□□□□ -2
GMDS-206ENST00000530075 GOLGA8NF8WBI6 632 aa2.54□□□□□ -2
GMDS-206ENST00000530075 K7EMT4 169 aa2.54□□□□□ -2
GMDS-206ENST00000530075 NVLO15381 856 aaKnown RBP2.54□□□□□ -2
GMDS-206ENST00000530075 U2AF2P26368 475 aaKnown RBP eCLIP2.54□□□□□ -2
GMDS-206ENST00000530075 SLC1A1P43005 524 aa2.54□□□□□ -2
GMDS-206ENST00000530075 TNNT2P45379 298 aaPredicted RBP2.54□□□□□ -2
GMDS-206ENST00000530075 CRISP1P54107 249 aa2.54□□□□□ -2
GMDS-206ENST00000530075 PRRX1P54821 245 aa2.54□□□□□ -2
GMDS-206ENST00000530075 TAS2R31P59538 309 aa2.54□□□□□ -2
GMDS-206ENST00000530075 CRADDP78560 199 aa2.54□□□□□ -2
GMDS-206ENST00000530075 CDK5Q00535 292 aa2.54□□□□□ -2
GMDS-206ENST00000530075 SP4Q02446 784 aa2.54□□□□□ -2
GMDS-206ENST00000530075 TGM3Q08188 693 aa2.54□□□□□ -2
GMDS-206ENST00000530075 RNASE13Q5GAN3 156 aaKnown RBP2.54□□□□□ -2
GMDS-206ENST00000530075 UBE2UQ5VVX9 321 aa2.54□□□□□ -2
GMDS-206ENST00000530075 RAET1LQ5VY80 246 aa2.54□□□□□ -2
GMDS-206ENST00000530075 UNQ9165/PRO28630Q6UXU0 137 aa2.54□□□□□ -2
GMDS-206ENST00000530075 NPSR1Q6W5P4 371 aa2.54□□□□□ -2
GMDS-206ENST00000530075 TAS2R42Q7RTR8 314 aa2.54□□□□□ -2
GMDS-206ENST00000530075 MIR7-3HGQ8N6C7 128 aa2.54□□□□□ -2
GMDS-206ENST00000530075 CAPSLQ8WWF8 208 aa2.54□□□□□ -2
GMDS-206ENST00000530075 SLC25A46Q96AG3 418 aa2.54□□□□□ -2
GMDS-206ENST00000530075 ECHDC3Q96DC8 303 aa2.54□□□□□ -2
GMDS-206ENST00000530075 PITPNC1Q9UKF7 332 aa2.54□□□□□ -2
GMDS-206ENST00000530075 ARHGEF11O15085 1522 aa2.53□□□□□ -2
GMDS-206ENST00000530075 SYNJ2BP-COX16A0A087WUM0 186 aa2.53□□□□□ -2
GMDS-206ENST00000530075 LYRM9A8MSI8 78 aa2.53□□□□□ -2
GMDS-206ENST00000530075 EIF4E2O60573 245 aaKnown RBP2.53□□□□□ -2
GMDS-206ENST00000530075 FLOT1O75955 427 aa2.53□□□□□ -2
GMDS-206ENST00000530075 IGLV3-25P01717 112 aa2.53□□□□□ -2
GMDS-206ENST00000530075 ARG1P05089 322 aa2.53□□□□□ -2
GMDS-206ENST00000530075 ERGP11308 486 aa2.53□□□□□ -2
GMDS-206ENST00000530075 PBLDP30039 288 aaPredicted RBP2.53□□□□□ -2
GMDS-206ENST00000530075 EIF3EP60228 445 aaKnown RBP2.53□□□□□ -2
GMDS-206ENST00000530075 TCEAL5Q5H9L2 206 aa2.53□□□□□ -2
GMDS-206ENST00000530075 C12orf54Q6X4T0 127 aa2.53□□□□□ -2
GMDS-206ENST00000530075 SLC16A14Q7RTX9 510 aa2.53□□□□□ -2
GMDS-206ENST00000530075 CDH26Q8IXH8 852 aa2.53□□□□□ -2
GMDS-206ENST00000530075 TMEM256Q8N2U0 113 aa2.53□□□□□ -2
GMDS-206ENST00000530075 CHST4Q8NCG5 386 aa2.53□□□□□ -2
GMDS-206ENST00000530075 OR52E2Q8NGJ4 325 aa2.53□□□□□ -2
GMDS-206ENST00000530075 OR4A4PQ8NGN8 299 aa2.53□□□□□ -2
GMDS-206ENST00000530075 RAB3IL1Q8TBN0 382 aa2.53□□□□□ -2
GMDS-206ENST00000530075 RTN4IP1Q8WWV3 396 aaPredicted RBP2.53□□□□□ -2
GMDS-206ENST00000530075 TCEAL3Q969E4 200 aa2.53□□□□□ -2
GMDS-206ENST00000530075 TMEM230Q96A57 120 aa2.53□□□□□ -2
GMDS-206ENST00000530075 RASD2Q96D21 266 aa2.53□□□□□ -2
GMDS-206ENST00000530075 RBBP8Q99708 897 aa2.53□□□□□ -2
GMDS-206ENST00000530075 SULT4A1Q9BR01 284 aa2.53□□□□□ -2
GMDS-206ENST00000530075 ZNF717Q9BY31 904 aaPredicted RBP2.53□□□□□ -2
GMDS-206ENST00000530075 KIF21AQ7Z4S6 1674 aa2.53□□□□□ -2
GMDS-206ENST00000530075 SMARCA2P51531 1590 aa2.53□□□□□ -2.01
GMDS-206ENST00000530075 SCN4AP35499 1836 aa2.52□□□□□ -2.01
GMDS-206ENST00000530075 SHANK1Q9Y566 2161 aa2.52□□□□□ -2.01
GMDS-206ENST00000530075 TRAV19A0A0A6YYK7 116 aa2.52□□□□□ -2.01
GMDS-206ENST00000530075 SIRPB1O00241 398 aa2.52□□□□□ -2.01
GMDS-206ENST00000530075 CHST1O43916 411 aa2.52□□□□□ -2.01
GMDS-206ENST00000530075 TROVE2P10155 538 aaKnown RBP eCLIP2.52□□□□□ -2.01
GMDS-206ENST00000530075 CCNG1P51959 295 aa2.52□□□□□ -2.01
GMDS-206ENST00000530075 GFERP55789 205 aa2.52□□□□□ -2.01
GMDS-206ENST00000530075 SYNJ2BPP57105 145 aa2.52□□□□□ -2.01
GMDS-206ENST00000530075 RPS23P62266 143 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms