RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 PAMR1Q6UXH9 720 aa12.65□□□□□ -0.38
TTC39A-216ENST00000530004 NCCRP1Q6ZVX7 275 aaPredicted RBP12.65□□□□□ -0.38
TTC39A-216ENST00000530004 LRRC18Q8N456 261 aa12.65□□□□□ -0.38
TTC39A-216ENST00000530004 ZNF676Q8N7Q3 588 aa12.65□□□□□ -0.38
TTC39A-216ENST00000530004 OR10S1Q8NGN2 331 aa12.65□□□□□ -0.38
TTC39A-216ENST00000530004 PRR7Q8TB68 274 aa12.65□□□□□ -0.38
TTC39A-216ENST00000530004 RGP1Q92546 391 aaPredicted RBP12.65□□□□□ -0.38
TTC39A-216ENST00000530004 OR14A2Q96R54 314 aa12.65□□□□□ -0.38
TTC39A-216ENST00000530004 C6orf62Q9GZU0 229 aaPredicted RBP12.65□□□□□ -0.38
TTC39A-216ENST00000530004 COMMD4Q9H0A8 199 aa12.65□□□□□ -0.38
TTC39A-216ENST00000530004 R4GMQ9 66 aa12.65□□□□□ -0.38
TTC39A-216ENST00000530004 A3GALT2U3KPV4 340 aa12.65□□□□□ -0.38
TTC39A-216ENST00000530004 RP1L1Q8IWN7 2480 aaPredicted RBP12.64□□□□□ -0.39
TTC39A-216ENST00000530004 TMEM212A6NML5 194 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 CCL21O00585 134 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 RER1O15258 196 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 SS18L1O75177 396 aaPredicted RBP12.64□□□□□ -0.39
TTC39A-216ENST00000530004 GATBO75879 557 aaKnown RBP12.64□□□□□ -0.39
TTC39A-216ENST00000530004 KRT33AO76009 404 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 IGHV3-9P01782 118 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 MYL9P24844 172 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 MTNR1BP49286 362 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 MRPS34P82930 218 aaKnown RBP12.64□□□□□ -0.39
TTC39A-216ENST00000530004 ENDOGQ14249 297 aaKnown RBP12.64□□□□□ -0.39
TTC39A-216ENST00000530004 TMEM211Q6ICI0 200 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 ZNF544Q6NX49 715 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 NAXEQ8NCW5 288 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 OR6Q1Q8NGQ2 317 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 ZFP3Q96NJ6 502 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 KCNS3Q9BQ31 491 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 GPR35Q9HC97 309 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 SLC22A13Q9Y226 551 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 EMC9Q9Y3B6 208 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 A0A1W2PPK0 400 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 ZNF878C9JN71 531 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 LOC110117498-PIK3R3F6TDL0 507 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 SRSF10O75494 262 aaKnown RBP12.64□□□□□ -0.39
TTC39A-216ENST00000530004 NPR2P20594 1047 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 AGTR1P30556 359 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 CCR9P51686 369 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 BMXP51813 675 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 CAV3P56539 151 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 ROR2Q01974 943 aaKnown RBP12.64□□□□□ -0.39
TTC39A-216ENST00000530004 FOXF2Q12947 444 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 ODF4Q2M2E3 257 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 CEACAM16Q2WEN9 425 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 UNQ9370/PRO34162Q6UXP9 181 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 LINC00299Q6ZSB3 139 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 FAM214BQ7L5A3 538 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 FJX1Q86VR8 437 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 CATSPERDQ86XM0 798 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 PPP1R14AQ96A00 147 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 LINC00470Q9BZP3 86 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 PNRC2Q9NPJ4 139 aaKnown RBP12.64□□□□□ -0.39
TTC39A-216ENST00000530004 SLC7A10Q9NS82 523 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 TMEM38BQ9NVV0 291 aa12.64□□□□□ -0.39
TTC39A-216ENST00000530004 CFAP46Q8IYW2 2715 aa12.63□□□□□ -0.39
TTC39A-216ENST00000530004 A0A1B0GUH1 482 aa12.63□□□□□ -0.39
TTC39A-216ENST00000530004 ZNF879B4DU55 563 aa12.63□□□□□ -0.39
TTC39A-216ENST00000530004 ARL6IP5O75915 188 aa12.63□□□□□ -0.39
TTC39A-216ENST00000530004 NCR1O76036 304 aa12.63□□□□□ -0.39
TTC39A-216ENST00000530004 CRHP06850 196 aa12.63□□□□□ -0.39
TTC39A-216ENST00000530004 INHBBP09529 407 aa12.63□□□□□ -0.39
TTC39A-216ENST00000530004 TMIGD3P0DMS9 266 aaPredicted RBP12.63□□□□□ -0.39
TTC39A-216ENST00000530004 MAGEB1P43366 347 aa12.63□□□□□ -0.39
TTC39A-216ENST00000530004 TAF13Q15543 124 aa12.63□□□□□ -0.39
TTC39A-216ENST00000530004 ZNF829Q3KNS6 432 aaPredicted RBP12.63□□□□□ -0.39
TTC39A-216ENST00000530004 FAM27BQ5VT28 67 aa12.63□□□□□ -0.39
TTC39A-216ENST00000530004 KLHL24Q6TFL4 600 aa12.63□□□□□ -0.39
TTC39A-216ENST00000530004 RHOUQ7L0Q8 258 aa12.63□□□□□ -0.39
TTC39A-216ENST00000530004 NUFIP2Q7Z417 695 aaKnown RBP12.63□□□□□ -0.39
TTC39A-216ENST00000530004 RDH10Q8IZV5 341 aa12.63□□□□□ -0.39
TTC39A-216ENST00000530004 GJC3Q8NFK1 279 aa12.63□□□□□ -0.39
TTC39A-216ENST00000530004 IL17RDQ8NFM7 739 aa12.63□□□□□ -0.39
TTC39A-216ENST00000530004 RND1Q92730 232 aa12.63□□□□□ -0.39
TTC39A-216ENST00000530004 APH1AQ96BI3 265 aa12.63□□□□□ -0.39
TTC39A-216ENST00000530004 FOXB1Q99853 325 aa12.63□□□□□ -0.39
TTC39A-216ENST00000530004 NOX4Q9NPH5 578 aa12.63□□□□□ -0.39
TTC39A-216ENST00000530004 OR52A1Q9UKL2 312 aa12.63□□□□□ -0.39
TTC39A-216ENST00000530004 CHD6Q8TD26 2715 aa12.62□□□□□ -0.39
TTC39A-216ENST00000530004 A0A0G2JNJ9 132 aa12.62□□□□□ -0.39
TTC39A-216ENST00000530004 TMEM269A0A1B0GVZ9 245 aa12.62□□□□□ -0.39
TTC39A-216ENST00000530004 OR6C65A6NJZ3 312 aa12.62□□□□□ -0.39
TTC39A-216ENST00000530004 ACOD1A6NK06 481 aa12.62□□□□□ -0.39
TTC39A-216ENST00000530004 TNFSF13O75888 250 aa12.62□□□□□ -0.39
TTC39A-216ENST00000530004 UCHL1P09936 223 aa12.62□□□□□ -0.39
TTC39A-216ENST00000530004 HSD11B1P28845 292 aa12.62□□□□□ -0.39
TTC39A-216ENST00000530004 DCTDP32321 178 aa12.62□□□□□ -0.39
TTC39A-216ENST00000530004 KIR2DL2P43627 348 aaPredicted RBP12.62□□□□□ -0.39
TTC39A-216ENST00000530004 Q499Y3 187 aa12.62□□□□□ -0.39
TTC39A-216ENST00000530004 HSD17B12Q53GQ0 312 aa12.62□□□□□ -0.39
TTC39A-216ENST00000530004 ZNF100Q8IYN0 542 aa12.62□□□□□ -0.39
TTC39A-216ENST00000530004 OR10AC1Q8NH08 325 aa12.62□□□□□ -0.39
TTC39A-216ENST00000530004 PHYHIPQ92561 330 aa12.62□□□□□ -0.39
TTC39A-216ENST00000530004 FBXO17Q96EF6 278 aa12.62□□□□□ -0.39
TTC39A-216ENST00000530004 SH3GL3Q99963 347 aa12.62□□□□□ -0.39
TTC39A-216ENST00000530004 PLEKHB1Q9UF11 243 aaPredicted RBP12.62□□□□□ -0.39
TTC39A-216ENST00000530004 Q9UFV3 132 aa12.62□□□□□ -0.39
TTC39A-216ENST00000530004 A0A075B6Q4 140 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 TRBV5-5A0A0J9YX44 114 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms