RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 PTTG1IPP53801 180 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 TGFBR3Q03167 851 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 DMWDQ09019 674 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 EDDM3AQ14507 147 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 NCMAPQ5T1S8 102 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 SLC48A1Q6P1K1 146 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 SCMH1Q96GD3 660 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 CTDSP1Q9GZU7 261 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 CTSFQ9UBX1 484 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 PCDHB10Q9UN67 800 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 PIAS3Q9Y6X2 628 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 A8MVM7 634 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 GALR3O60755 368 aaPredicted RBP6.96□□□□□ -1.29
CTNND1-223ENST00000529986 SEMG1P04279 462 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 CD1EP15812 388 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 CEBPBP17676 345 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 RAB38P57729 211 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 GPNMBQ14956 572 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 NKG7Q16617 165 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 SLC35D3Q5M8T2 416 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 OR2A2Q6IF42 318 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 STAC2Q6ZMT1 411 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 ADIPOR2Q86V24 386 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 TMEM104Q8NE00 496 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 OR4S1Q8NGB4 309 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 CMTM2Q8TAZ6 248 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 ZFPM2Q8WW38 1151 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 DPF1Q92782 380 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 VAMP8Q9BV40 100 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 RAB9BQ9NP90 201 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 KCNG2Q9UJ96 466 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 STRAPQ9Y3F4 350 aaKnown RBP6.96□□□□□ -1.29
CTNND1-223ENST00000529986 H3BP45 60 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 NXPH2O95156 264 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 GUSBP08236 651 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 HNRNPA1P09651 372 aaKnown RBP eCLIP6.96□□□□□ -1.29
CTNND1-223ENST00000529986 HLXQ14774 488 aaPredicted RBP6.96□□□□□ -1.29
CTNND1-223ENST00000529986 C17orf99Q6UX52 265 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 MAMSTRQ6ZN01 415 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 LANCL3Q6ZV70 420 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 SYT13Q7L8C5 426 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 AAED1Q7RTV5 226 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 LRP11Q86VZ4 500 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 KIRREL1Q96J84 757 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 CXorf58Q96LI9 332 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 DCBLD2Q96PD2 775 aa6.96□□□□□ -1.29
CTNND1-223ENST00000529986 HCRTR1O43613 425 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 PRKNO60260 465 aaPredicted RBP6.96□□□□□ -1.3
CTNND1-223ENST00000529986 AKR7A3O95154 331 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 CHRM2P08172 466 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 PRPH2P23942 346 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 MIDNQ504T8 468 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 ZNF66Q6ZN08 573 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 OR2W3Q7Z3T1 314 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 LYG2Q86SG7 212 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 SLC43A2Q8N370 569 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 GALNT16Q8N428 558 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 C11orf42Q8N5U0 333 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 SLC35G3Q8N808 338 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 OR4D10Q8NGI6 311 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 SFXN1Q9H9B4 322 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 LOXHD1Q8IVV2 1947 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 CHEK1O14757 476 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 FCMRO60667 390 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 WNT1P04628 370 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 ABOP16442 354 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 FGF7P21781 194 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 EDDM3BP56851 147 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 GGNBP1Q5YKI7 109 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 TCTN3Q6NUS6 607 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 NHLRC1Q6VVB1 395 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 CATSPERDQ86XM0 798 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 SPOCK3Q9BQ16 436 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 C1QTNF6Q9BXI9 259 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 MS4A7Q9GZW8 240 aaPredicted RBP6.96□□□□□ -1.3
CTNND1-223ENST00000529986 MYO5AQ9Y4I1 1855 aaKnown RBP6.96□□□□□ -1.3
CTNND1-223ENST00000529986 PHIPQ8WWQ0 1821 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 PRRC2BQ5JSZ5 2229 aaKnown RBP6.96□□□□□ -1.3
CTNND1-223ENST00000529986 TUBAL3A6NHL2 446 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 ZNF891A8MT65 544 aaPredicted RBP6.96□□□□□ -1.3
CTNND1-223ENST00000529986 ABHD16AO95870 558 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 IGHV3-9P01782 118 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 ADRA2CP18825 462 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 USF1P22415 310 aaPredicted RBP6.96□□□□□ -1.3
CTNND1-223ENST00000529986 VEGFBP49765 207 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 ZNF133P52736 654 aaPredicted RBP6.96□□□□□ -1.3
CTNND1-223ENST00000529986 UBE2G1P62253 170 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 HSF1Q00613 529 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 PRTGQ2VWP7 1150 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 COL13A1Q5TAT6 717 aaPredicted RBP6.96□□□□□ -1.3
CTNND1-223ENST00000529986 RPL7L1Q6DKI1 246 aaKnown RBP6.96□□□□□ -1.3
CTNND1-223ENST00000529986 PRR27Q6MZM9 219 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 H2BFWTQ7Z2G1 175 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 SLC35A4Q96G79 324 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 C2orf50Q96LR7 162 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 PLEKHF2Q9H8W4 249 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 UCK1Q9HA47 277 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 CMC2Q9NRP2 79 aa6.96□□□□□ -1.3
CTNND1-223ENST00000529986 MICAL3Q7RTP6 2002 aa6.95□□□□□ -1.3
CTNND1-223ENST00000529986 GSTP1P09211 210 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms