RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 OR5M9Q8NGP3 310 aa18■□□□□ 0.47
SMCO4-203ENST00000526869 C6orf62Q9GZU0 229 aaPredicted RBP18■□□□□ 0.47
SMCO4-203ENST00000526869 HMG20AQ9NP66 347 aa18■□□□□ 0.47
SMCO4-203ENST00000526869 NOX4Q9NPH5 578 aa18■□□□□ 0.47
SMCO4-203ENST00000526869 AKIP1Q9NQ31 210 aa18■□□□□ 0.47
SMCO4-203ENST00000526869 ATPIF1Q9UII2 106 aa18■□□□□ 0.47
SMCO4-203ENST00000526869 GTF2A1LQ9UNN4 478 aa18■□□□□ 0.47
SMCO4-203ENST00000526869 CACNA1GO43497 2377 aa17.99■□□□□ 0.47
SMCO4-203ENST00000526869 CLDN25C9JDP6 229 aa17.99■□□□□ 0.47
SMCO4-203ENST00000526869 PIN1P1O15428 100 aa17.99■□□□□ 0.47
SMCO4-203ENST00000526869 S100A5P33763 92 aa17.99■□□□□ 0.47
SMCO4-203ENST00000526869 BMXP51813 675 aa17.99■□□□□ 0.47
SMCO4-203ENST00000526869 FBXW9Q5XUX1 488 aa17.99■□□□□ 0.47
SMCO4-203ENST00000526869 UNQ6494/PRO21346Q6UXR6 183 aa17.99■□□□□ 0.47
SMCO4-203ENST00000526869 FAM214BQ7L5A3 538 aa17.99■□□□□ 0.47
SMCO4-203ENST00000526869 DPPA2Q7Z7J5 298 aa17.99■□□□□ 0.47
SMCO4-203ENST00000526869 Q8NA96 180 aa17.99■□□□□ 0.47
SMCO4-203ENST00000526869 KCTD12Q96CX2 325 aaKnown RBP17.99■□□□□ 0.47
SMCO4-203ENST00000526869 SH3GL3Q99963 347 aa17.99■□□□□ 0.47
SMCO4-203ENST00000526869 WDR12Q9GZL7 423 aaKnown RBP17.99■□□□□ 0.47
SMCO4-203ENST00000526869 PBOV1Q9GZY1 135 aa17.99■□□□□ 0.47
SMCO4-203ENST00000526869 HHLA2Q9UM44 414 aa17.99■□□□□ 0.47
SMCO4-203ENST00000526869 TIMM10BQ9Y5J6 103 aa17.99■□□□□ 0.47
SMCO4-203ENST00000526869 DMXL2Q8TDJ6 3036 aa17.98■□□□□ 0.47
SMCO4-203ENST00000526869 PHF3Q92576 2039 aaKnown RBP17.98■□□□□ 0.47
SMCO4-203ENST00000526869 CACNA1CQ13936 2221 aa17.98■□□□□ 0.47
SMCO4-203ENST00000526869 PDCD5O14737 125 aa17.98■□□□□ 0.47
SMCO4-203ENST00000526869 SGCEO43556 437 aa17.98■□□□□ 0.47
SMCO4-203ENST00000526869 WDR1O75083 606 aa17.98■□□□□ 0.47
SMCO4-203ENST00000526869 TMEM127O75204 238 aa17.98■□□□□ 0.47
SMCO4-203ENST00000526869 CNOT4O95628 575 aaKnown RBP17.98■□□□□ 0.47
SMCO4-203ENST00000526869 IGHV3-9P01782 118 aa17.98■□□□□ 0.47
SMCO4-203ENST00000526869 HOXD4P09016 255 aaPredicted RBP17.98■□□□□ 0.47
SMCO4-203ENST00000526869 RAB3BP20337 219 aa17.98■□□□□ 0.47
SMCO4-203ENST00000526869 MPGP29372 298 aa17.98■□□□□ 0.47
SMCO4-203ENST00000526869 CX3CR1P49238 355 aa17.98■□□□□ 0.47
SMCO4-203ENST00000526869 ZNF846Q147U1 533 aa17.98■□□□□ 0.47
SMCO4-203ENST00000526869 LINC00303Q3SY05 128 aa17.98■□□□□ 0.47
SMCO4-203ENST00000526869 SLC16A14Q7RTX9 510 aa17.98■□□□□ 0.47
SMCO4-203ENST00000526869 ACOT12Q8WYK0 555 aa17.98■□□□□ 0.47
SMCO4-203ENST00000526869 SPTSSAQ969W0 71 aa17.98■□□□□ 0.47
SMCO4-203ENST00000526869 SLITRK2Q9H156 845 aa17.98■□□□□ 0.47
SMCO4-203ENST00000526869 ZCCHC4Q9H5U6 513 aa17.98■□□□□ 0.47
SMCO4-203ENST00000526869 PLEK2Q9NYT0 353 aa17.98■□□□□ 0.47
SMCO4-203ENST00000526869 A0A0G2JK05 382 aa17.97■□□□□ 0.47
SMCO4-203ENST00000526869 LOC107986453A0A1B0GWG9 222 aa17.97■□□□□ 0.47
SMCO4-203ENST00000526869 MBD3L4A6NDZ8 208 aaPredicted RBP17.97■□□□□ 0.47
SMCO4-203ENST00000526869 MBD3L3A6NE82 208 aaPredicted RBP17.97■□□□□ 0.47
SMCO4-203ENST00000526869 OR6C6A6NF89 314 aa17.97■□□□□ 0.47
SMCO4-203ENST00000526869 MBD3L5A6NJ08 208 aaPredicted RBP17.97■□□□□ 0.47
SMCO4-203ENST00000526869 TTRP02766 147 aa17.97■□□□□ 0.47
SMCO4-203ENST00000526869 CRHP06850 196 aa17.97■□□□□ 0.47
SMCO4-203ENST00000526869 MMP7P09237 267 aaPredicted RBP17.97■□□□□ 0.47
SMCO4-203ENST00000526869 ZNF32P17041 273 aa17.97■□□□□ 0.47
SMCO4-203ENST00000526869 SRMP19623 302 aa17.97■□□□□ 0.47
SMCO4-203ENST00000526869 CRYGSP22914 178 aa17.97■□□□□ 0.47
SMCO4-203ENST00000526869 ETV6P41212 452 aa17.97■□□□□ 0.47
SMCO4-203ENST00000526869 EIF2S3LQ2VIR3 472 aaKnown RBP17.97■□□□□ 0.47
SMCO4-203ENST00000526869 KRTAP27-1Q3LI81 207 aa17.97■□□□□ 0.47
SMCO4-203ENST00000526869 SLC36A2Q495M3 483 aa17.97■□□□□ 0.47
SMCO4-203ENST00000526869 SKA3Q8IX90 412 aa17.97■□□□□ 0.47
SMCO4-203ENST00000526869 UBE2J2Q8N2K1 259 aa17.97■□□□□ 0.47
SMCO4-203ENST00000526869 MFSD4AQ8N468 514 aa17.97■□□□□ 0.47
SMCO4-203ENST00000526869 C9orf106Q8NAJ2 232 aa17.97■□□□□ 0.47
SMCO4-203ENST00000526869 OR6K3Q8NGY3 331 aa17.97■□□□□ 0.47
SMCO4-203ENST00000526869 OR10AC1Q8NH08 325 aa17.97■□□□□ 0.47
SMCO4-203ENST00000526869 MBD3L2Q8NHZ7 208 aaPredicted RBP17.97■□□□□ 0.47
SMCO4-203ENST00000526869 TSEN15Q8WW01 171 aaKnown RBP17.97■□□□□ 0.47
SMCO4-203ENST00000526869 WDFY2Q96P53 400 aa17.97■□□□□ 0.47
SMCO4-203ENST00000526869 KCNS3Q9BQ31 491 aa17.97■□□□□ 0.47
SMCO4-203ENST00000526869 OR2H1Q9GZK4 316 aa17.97■□□□□ 0.47
SMCO4-203ENST00000526869 PLGRKTQ9HBL7 147 aa17.97■□□□□ 0.47
SMCO4-203ENST00000526869 DHDHQ9UQ10 334 aa17.97■□□□□ 0.47
SMCO4-203ENST00000526869 SLC5A6Q9Y289 635 aa17.97■□□□□ 0.47
SMCO4-203ENST00000526869 MGAQ8IWI9 3026 aa17.97■□□□□ 0.47
SMCO4-203ENST00000526869 NCOA6Q14686 2063 aaPredicted RBP17.97■□□□□ 0.47
SMCO4-203ENST00000526869 FIGNL2A6NMB9 653 aa17.96■□□□□ 0.47
SMCO4-203ENST00000526869 TTLL8A6PVC2 850 aa17.96■□□□□ 0.47
SMCO4-203ENST00000526869 NOTOA8MTQ0 251 aa17.96■□□□□ 0.47
SMCO4-203ENST00000526869 C1QTNF9BB2RNN3 333 aa17.96■□□□□ 0.47
SMCO4-203ENST00000526869 SYNGR3O43761 229 aa17.96■□□□□ 0.47
SMCO4-203ENST00000526869 CD2P06729 351 aa17.96■□□□□ 0.47
SMCO4-203ENST00000526869 C1QTNF9P0C862 333 aa17.96■□□□□ 0.47
SMCO4-203ENST00000526869 BMP4P12644 408 aa17.96■□□□□ 0.47
SMCO4-203ENST00000526869 PRKXP51817 358 aa17.96■□□□□ 0.47
SMCO4-203ENST00000526869 TDGF1P3P51864 188 aa17.96■□□□□ 0.47
SMCO4-203ENST00000526869 ZNF121P58317 390 aaPredicted RBP17.96■□□□□ 0.47
SMCO4-203ENST00000526869 FAPQ12884 760 aa17.96■□□□□ 0.47
SMCO4-203ENST00000526869 DCTN2Q13561 401 aaKnown RBP17.96■□□□□ 0.47
SMCO4-203ENST00000526869 TFAP2EQ6VUC0 442 aa17.96■□□□□ 0.47
SMCO4-203ENST00000526869 PRSS45Q7RTY3 260 aa17.96■□□□□ 0.47
SMCO4-203ENST00000526869 RDH10Q8IZV5 341 aa17.96■□□□□ 0.47
SMCO4-203ENST00000526869 ZNF283Q8N7M2 679 aa17.96■□□□□ 0.47
SMCO4-203ENST00000526869 OR1F12Q8NHA8 337 aa17.96■□□□□ 0.47
SMCO4-203ENST00000526869 FAM57AQ8TBR7 257 aa17.96■□□□□ 0.47
SMCO4-203ENST00000526869 ZCCHC14Q8WYQ9 949 aaKnown RBP17.96■□□□□ 0.47
SMCO4-203ENST00000526869 BORCS5Q969J3 196 aa17.96■□□□□ 0.47
SMCO4-203ENST00000526869 PPP1R14AQ96A00 147 aa17.96■□□□□ 0.47
SMCO4-203ENST00000526869 TMEM106AQ96A25 262 aa17.96■□□□□ 0.47
SMCO4-203ENST00000526869 ZNF71Q9NQZ8 489 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms