RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 CSMD1Q96PZ7 3565 aa11.15□□□□□ -0.63
SMPD1-202ENST00000526280 VSTM5A8MXK1 200 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 SELENOFO60613 162 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 CLPTM1O96005 669 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 CD8AP01732 235 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 OR4A8P0C604 315 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 FAM157BP0CG42 384 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 SERPINF1P36955 418 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 RAD52P43351 418 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 RPL5P46777 297 aaKnown RBP11.14□□□□□ -0.63
SMPD1-202ENST00000526280 SNRPGP62308 76 aaKnown RBP11.14□□□□□ -0.63
SMPD1-202ENST00000526280 ECH1Q13011 328 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 ADIPOQQ15848 244 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 RSPO1Q2MKA7 263 aaPredicted RBP11.14□□□□□ -0.63
SMPD1-202ENST00000526280 MST1LQ2TV78 715 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 KRTAP27-1Q3LI81 207 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 SLC25A30Q5SVS4 291 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 LCN1P1Q5VSP4 162 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 AGAP6Q5VW22 663 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 SHFQ7M4L6 423 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 DPY19L4Q7Z388 723 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 DCXRQ7Z4W1 244 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 GID4Q8IVV7 300 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 FBXL14Q8N1E6 418 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 MUC15Q8N387 334 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 OR10S1Q8NGN2 331 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 OR6N2Q8NGY6 317 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 ST7LQ8TDW4 575 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 CYGBQ8WWM9 190 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 SLC7A6Q92536 515 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 PIGTQ969N2 578 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 MBD6Q96DN6 1003 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 C4orf45Q96LM5 186 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 TRAF4Q9BUZ4 470 aaPredicted RBP11.14□□□□□ -0.63
SMPD1-202ENST00000526280 BCL2L14Q9BZR8 327 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 YIPF3Q9GZM5 350 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 EIF3KQ9UBQ5 218 aaKnown RBP11.14□□□□□ -0.63
SMPD1-202ENST00000526280 MYRFQ9Y2G1 1151 aa11.14□□□□□ -0.63
SMPD1-202ENST00000526280 CCDC168Q8NDH2 2452 aa11.13□□□□□ -0.63
SMPD1-202ENST00000526280 SMIM31A0A1B0GVY4 71 aa11.13□□□□□ -0.63
SMPD1-202ENST00000526280 SLC22A31A6NKX4 558 aa11.13□□□□□ -0.63
SMPD1-202ENST00000526280 OVOL3O00110 214 aa11.13□□□□□ -0.63
SMPD1-202ENST00000526280 GPRIN2O60269 458 aa11.13□□□□□ -0.63
SMPD1-202ENST00000526280 DBHP09172 617 aa11.13□□□□□ -0.63
SMPD1-202ENST00000526280 RPS23P62266 143 aaKnown RBP11.13□□□□□ -0.63
SMPD1-202ENST00000526280 ADARB1P78563 741 aaKnown RBP11.13□□□□□ -0.63
SMPD1-202ENST00000526280 GGTLC2Q14390 218 aa11.13□□□□□ -0.63
SMPD1-202ENST00000526280 MSMPQ1L6U9 139 aa11.13□□□□□ -0.63
SMPD1-202ENST00000526280 SWI5Q1ZZU3 235 aa11.13□□□□□ -0.63
SMPD1-202ENST00000526280 C11orf71Q6IPW1 123 aa11.13□□□□□ -0.63
SMPD1-202ENST00000526280 ARL9Q6T311 187 aa11.13□□□□□ -0.63
SMPD1-202ENST00000526280 ZNF101Q8IZC7 436 aa11.13□□□□□ -0.63
SMPD1-202ENST00000526280 TSPAN14Q8NG11 270 aa11.13□□□□□ -0.63
SMPD1-202ENST00000526280 OTOSQ8NHW6 89 aa11.13□□□□□ -0.63
SMPD1-202ENST00000526280 ZNF582Q96NG8 517 aaPredicted RBP11.13□□□□□ -0.63
SMPD1-202ENST00000526280 DCLRE1CQ96SD1 692 aaKnown RBP11.13□□□□□ -0.63
SMPD1-202ENST00000526280 ATF6BQ99941 703 aa11.13□□□□□ -0.63
SMPD1-202ENST00000526280 ELOVL3Q9HB03 270 aa11.13□□□□□ -0.63
SMPD1-202ENST00000526280 CBLN4Q9NTU7 201 aa11.13□□□□□ -0.63
SMPD1-202ENST00000526280 DDX28Q9NUL7 540 aaKnown RBP11.13□□□□□ -0.63
SMPD1-202ENST00000526280 TBCCD1Q9NVR7 557 aa11.13□□□□□ -0.63
SMPD1-202ENST00000526280 HAO2Q9NYQ3 351 aa11.13□□□□□ -0.63
SMPD1-202ENST00000526280 CMAHPQ9Y471 501 aa11.13□□□□□ -0.63
SMPD1-202ENST00000526280 USF3Q68DE3 2245 aa11.13□□□□□ -0.63
SMPD1-202ENST00000526280 H0YAE9 185 aa11.12□□□□□ -0.63
SMPD1-202ENST00000526280 SMPD2O60906 423 aa11.12□□□□□ -0.63
SMPD1-202ENST00000526280 ABHD16AO95870 558 aa11.12□□□□□ -0.63
SMPD1-202ENST00000526280 NGFP01138 241 aa11.12□□□□□ -0.63
SMPD1-202ENST00000526280 TFAP2AP05549 437 aa11.12□□□□□ -0.63
SMPD1-202ENST00000526280 GABRB1P18505 474 aa11.12□□□□□ -0.63
SMPD1-202ENST00000526280 HTR1FP30939 366 aa11.12□□□□□ -0.63
SMPD1-202ENST00000526280 NAA10P41227 235 aaPredicted RBP11.12□□□□□ -0.63
SMPD1-202ENST00000526280 EIF2B1Q14232 305 aaKnown RBP11.12□□□□□ -0.63
SMPD1-202ENST00000526280 EFNB3Q15768 340 aa11.12□□□□□ -0.63
SMPD1-202ENST00000526280 OCLNQ16625 522 aa11.12□□□□□ -0.63
SMPD1-202ENST00000526280 UNQ6126/PRO20091Q6UXV3 157 aa11.12□□□□□ -0.63
SMPD1-202ENST00000526280 SLC16A9Q7RTY1 509 aa11.12□□□□□ -0.63
SMPD1-202ENST00000526280 C1orf174Q8IYL3 243 aa11.12□□□□□ -0.63
SMPD1-202ENST00000526280 ZNF454Q8N9F8 522 aa11.12□□□□□ -0.63
SMPD1-202ENST00000526280 ZNF555Q8NEP9 628 aa11.12□□□□□ -0.63
SMPD1-202ENST00000526280 RHOXF1Q8NHV9 184 aa11.12□□□□□ -0.63
SMPD1-202ENST00000526280 RNF133Q8WVZ7 376 aa11.12□□□□□ -0.63
SMPD1-202ENST00000526280 IPCEF1Q8WWN9 437 aaPredicted RBP11.12□□□□□ -0.63
SMPD1-202ENST00000526280 MRPL24Q96A35 216 aaKnown RBP11.12□□□□□ -0.63
SMPD1-202ENST00000526280 SLAMF6Q96DU3 332 aa11.12□□□□□ -0.63
SMPD1-202ENST00000526280 ABHD6Q9BV23 337 aa11.12□□□□□ -0.63
SMPD1-202ENST00000526280 OR51B6Q9H340 312 aa11.12□□□□□ -0.63
SMPD1-202ENST00000526280 BEX4Q9NWD9 120 aaPredicted RBP11.12□□□□□ -0.63
SMPD1-202ENST00000526280 DNAJC27Q9NZQ0 273 aa11.12□□□□□ -0.63
SMPD1-202ENST00000526280 WARS2Q9UGM6 360 aaKnown RBP11.12□□□□□ -0.63
SMPD1-202ENST00000526280 GRIP1Q9Y3R0 1128 aa11.12□□□□□ -0.63
SMPD1-202ENST00000526280 ARID1AO14497 2285 aa11.12□□□□□ -0.63
SMPD1-202ENST00000526280 ARFGEF3Q5TH69 2177 aa11.12□□□□□ -0.63
SMPD1-202ENST00000526280 TMEM129A0AVI4 362 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 B9A039 149 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 F5H5K5 113 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 MPZL2O60487 215 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 ENTPD6O75354 484 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 LCKP06239 509 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 GNAO1P09471 354 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms