RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 OR52A1Q9UKL2 312 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 CA5BQ9Y2D0 317 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 POLR3HQ9Y535 204 aaPredicted RBP2.86□□□□□ -1.95
CD44-217ENST00000525348 OR51B4Q9Y5P0 310 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 CROCC2H7BZ55 1655 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 NAIPQ13075 1403 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 MYH9P35579 1960 aaKnown RBP2.85□□□□□ -1.95
CD44-217ENST00000525348 PXDNQ92626 1479 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 RGPD8O14715 1765 aaPredicted RBP2.85□□□□□ -1.95
CD44-217ENST00000525348 MAP2P11137 1827 aaKnown RBP2.85□□□□□ -1.95
CD44-217ENST00000525348 ATP6AP2A0A1C7CYW4 349 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 ISPDA4D126 451 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 I3L4J1 428 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 I3L521 148 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 PSMD12O00232 456 aaPredicted RBP2.85□□□□□ -1.95
CD44-217ENST00000525348 ARPC3O15145 178 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 RGS5O15539 181 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 RNF13O43567 381 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 SNAI2O43623 268 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 LCMT2O60294 686 aaKnown RBP2.85□□□□□ -1.95
CD44-217ENST00000525348 RAMP3O60896 148 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 SDC3O75056 442 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 STX11O75558 287 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 OR6A2O95222 327 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 TDP2O95551 362 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 IGF2P01344 180 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 ZNF806P0C7X5 589 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 RD3LP0DJH9 198 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 UQCRBP14927 111 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 KCNE1P15382 129 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 AREGP15514 252 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 RPA2P15927 270 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 ZNF25P17030 456 aaPredicted RBP2.85□□□□□ -1.95
CD44-217ENST00000525348 GSTM3P21266 225 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 ATP6V1B2P21281 511 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 ZP3P21754 424 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 FMO3P31513 532 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 ARR3P36575 388 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 DDOSTP39656 456 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 MAGEA2P43356 314 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 GABRA4P48169 554 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 XKP51811 444 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 HMGCS2P54868 508 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 RAP1BP61224 184 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 RAB11AP62491 216 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 MFGE8Q08431 387 aaPredicted RBP2.85□□□□□ -1.95
CD44-217ENST00000525348 INCA1Q0VD86 236 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 STX4Q12846 297 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 PDIA2Q13087 525 aaKnown RBP2.85□□□□□ -1.95
CD44-217ENST00000525348 ORC2Q13416 577 aaPredicted RBP2.85□□□□□ -1.95
CD44-217ENST00000525348 ABRAXAS2Q15018 415 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 P2RY14Q15391 338 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 TRIP10Q15642 601 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 RAB11BQ15907 218 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 ZNF691Q5VV52 312 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 PLCXD3Q63HM9 321 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 LPCAT4Q643R3 524 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 TIGD3Q6B0B8 471 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 OR8G2PQ6IF36 304 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 PRR5LQ6MZQ0 368 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 ULK3Q6PHR2 472 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 UNQ9370/PRO34162Q6UXP9 181 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 NRMQ8IXM6 262 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 HS3ST5Q8IZT8 346 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 SAMD12Q8N8I0 201 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 FADS6Q8N9I5 356 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 CCDC71LQ8N9Z2 235 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 MFSD9Q8NBP5 474 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 CCNYQ8ND76 341 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 CHDHQ8NE62 594 aaPredicted RBP2.85□□□□□ -1.95
CD44-217ENST00000525348 OR4D6Q8NGJ1 314 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 C16orf78Q8WTQ4 265 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 SDR42E1Q8WUS8 393 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 DNAJB3Q8WWF6 145 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 PPP3R2Q96LZ3 170 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 AMDHD1Q96NU7 426 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 COL21A1Q96P44 957 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 QKIQ96PU8 341 aaKnown RBP eCLIP2.85□□□□□ -1.95
CD44-217ENST00000525348 CNN2Q99439 309 aaKnown RBP2.85□□□□□ -1.95
CD44-217ENST00000525348 SERPINI1Q99574 410 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 DOK1Q99704 481 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 TCEAL7Q9BRU2 100 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 MND1Q9BWT6 205 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 LRRC2Q9BYS8 371 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 MIXL1Q9H2W2 232 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 TRABDQ9H4I3 376 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 KIR3DX1Q9H7L2 352 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 GPN2Q9H9Y4 310 aaPredicted RBP2.85□□□□□ -1.95
CD44-217ENST00000525348 TMBIM4Q9HC24 238 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 WFDC1Q9HC57 220 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 MTCH1Q9NZJ7 389 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 TMEM216Q9P0N5 145 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 ARMCX3Q9UH62 379 aaPredicted RBP2.85□□□□□ -1.95
CD44-217ENST00000525348 CRLS1Q9UJA2 301 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 KLHL21Q9UJP4 597 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 ZNF225Q9UK10 706 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 DKKL1Q9UK85 242 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 KCNK6Q9Y257 313 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 OR1A2Q9Y585 309 aa2.85□□□□□ -1.95
CD44-217ENST00000525348 ALG6Q9Y672 507 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms