RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 GPN1Q9HCN4 374 aaPredicted RBP1.18□□□□□ -2.22
CD44-212ENST00000524922 SLC17A5Q9NRA2 495 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 SLCO1C1Q9NYB5 712 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 TAS2R7Q9NYW3 318 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 KLRF1Q9NZS2 232 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 DKKL1Q9UK85 242 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 VPREB3Q9UKI3 123 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 PSME2Q9UL46 239 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 ZNF148Q9UQR1 794 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 VSIG4Q9Y279 399 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 TRAPPC4Q9Y296 219 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 SLC9A8Q9Y2E8 581 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 SLC6A5Q9Y345 797 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.18□□□□□ -2.22
CD44-212ENST00000524922 HDGFL3Q9Y3E1 203 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 INSIG2Q9Y5U4 225 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 AUP1Q9Y679 476 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 USH1CQ9Y6N9 552 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 CCDC88CQ9P219 2028 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 DNAH17Q9UFH2 4485 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 VPS13DQ5THJ4 4388 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 hCG_1818297A0A087WSY0 165 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 A0A087X0M5 115 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 UQCRHLA0A096LP55 91 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 A0A096LPI6 279 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 A0A0A6YYD5 115 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 KIR2DS1A0A191URI9 304 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 LOC102725191A0A1B0GVB3 256 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 A0A1B0GWJ7 208 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 A0A1B0GX30 115 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 RBMY1BA6NDE4 496 aaKnown RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 BTBD17A6NE02 478 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 RBMY1EA6NEQ0 496 aaKnown RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 VGLL3A8MV65 326 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 CENPBD1B2RD01 187 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 CLDN25C9JDP6 229 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 E5RI56 91 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 KRTAP4-16G5E9R7 235 aaPredicted RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 H0YC42 278 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 PLXNB1O43157 2135 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 ZNF208O43345 1280 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 ERI3O43414 337 aaKnown RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 NDUFA2O43678 99 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 OR1F1O43749 312 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 LCMT2O60294 686 aaKnown RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 OR1I1O60431 355 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 EIF4E2O60573 245 aaKnown RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 RAMP1O60894 148 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 KERAO60938 352 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 UGT2B11O75310 529 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 MFN2O95140 757 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 MPZL1O95297 269 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 TTC4O95801 387 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 GUCA1CO95843 209 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 ECDO95905 644 aaPredicted RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 SCGB1D1O95968 90 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 OTCP00480 354 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 CALCAP01258 141 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 IGHV2-70P01814 119 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 GBAP04062 536 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 IFNA16P05015 189 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 IGFBP1P08833 259 aaPredicted RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 OR4A8P0C604 315 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 LINGO3P0C6S8 592 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 RBMY1DP0C7P1 496 aaKnown RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 PNMA6AP0CW24 399 aaPredicted RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 CT45A8P0DMV1 189 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 CT45A9P0DMV2 189 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 C1GALT1C1LP0DN25 315 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 OR12D1P0DN82 309 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 CPMP14384 443 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 ZNF250P15622 560 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 CBR1P16152 277 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 ZNF19P17023 458 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 RPL35AP18077 110 aaKnown RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 CSNK2A2P19784 350 aaPredicted RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 CPN2P22792 545 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 IGHV1-2P23083 117 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 IL2RGP31785 369 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 KRT20P35900 424 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 ANP32AP39687 249 aaKnown RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 CETN2P41208 172 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 MAP3K8P41279 467 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 BDKRB1P46663 353 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 IER3P46695 156 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 TRPC1P48995 793 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 DYNLT3P51808 116 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 HNRNPA3P51991 378 aaKnown RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 SUCLG1P53597 346 aaKnown RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 FBXW4P57775 412 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 RAB10P61026 200 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 POLR2FP61218 127 aaKnown RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 H3F3AP84243 136 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 IL1RL1Q01638 556 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 NAAAQ02083 359 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 TRIP10Q15642 601 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 FAM189A2Q15884 450 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 SGCBQ16585 318 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 KLHL38Q2WGJ6 581 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 PLPPR5Q32ZL2 321 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms