RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 GPR160Q9UJ42 338 aa12.97□□□□□ -0.33
SF3B2-202ENST00000524475 ORC6Q9Y5N6 252 aa12.97□□□□□ -0.33
SF3B2-202ENST00000524475 ACANP16112 2415 aa12.96□□□□□ -0.33
SF3B2-202ENST00000524475 M0R233 179 aa12.96□□□□□ -0.33
SF3B2-202ENST00000524475 ZNF593O00488 134 aaPredicted RBP12.96□□□□□ -0.33
SF3B2-202ENST00000524475 PRKYO43930 277 aa12.96□□□□□ -0.33
SF3B2-202ENST00000524475 EFNA4P52798 201 aa12.96□□□□□ -0.33
SF3B2-202ENST00000524475 PPP1CBP62140 327 aa12.96□□□□□ -0.33
SF3B2-202ENST00000524475 RSPO1Q2MKA7 263 aaPredicted RBP12.96□□□□□ -0.33
SF3B2-202ENST00000524475 ZNF718Q3SXZ3 478 aa12.96□□□□□ -0.33
SF3B2-202ENST00000524475 NXNL2Q5VZ03 156 aa12.96□□□□□ -0.33
SF3B2-202ENST00000524475 CBR4Q8N4T8 237 aa12.96□□□□□ -0.33
SF3B2-202ENST00000524475 ZNF454Q8N9F8 522 aa12.96□□□□□ -0.33
SF3B2-202ENST00000524475 WFDC11Q8NEX6 87 aa12.96□□□□□ -0.33
SF3B2-202ENST00000524475 OR10S1Q8NGN2 331 aa12.96□□□□□ -0.33
SF3B2-202ENST00000524475 ABHD4Q8TB40 342 aa12.96□□□□□ -0.33
SF3B2-202ENST00000524475 TMEM163Q8TC26 289 aa12.96□□□□□ -0.33
SF3B2-202ENST00000524475 C1QTNF5Q9BXJ0 243 aa12.96□□□□□ -0.33
SF3B2-202ENST00000524475 RAB1BQ9H0U4 201 aa12.96□□□□□ -0.33
SF3B2-202ENST00000524475 OR51V1Q9H2C8 321 aa12.96□□□□□ -0.33
SF3B2-202ENST00000524475 CHD3Q12873 2000 aaKnown RBP12.96□□□□□ -0.34
SF3B2-202ENST00000524475 ZNF878C9JN71 531 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 F12P00748 615 aaPredicted RBP12.95□□□□□ -0.34
SF3B2-202ENST00000524475 NGFP01138 241 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 ERCC1P07992 297 aaPredicted RBP12.95□□□□□ -0.34
SF3B2-202ENST00000524475 SPARCP09486 303 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 CSF3P09919 207 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 PSKH1P11801 424 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 NUDT6P53370 316 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 DSCR9P59020 149 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 ERVS71-1P61550 626 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 GGTLC2Q14390 218 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 LCN1P1Q5VSP4 162 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 AADACL4Q5VUY2 407 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 DCXRQ7Z4W1 244 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 LRP11Q86VZ4 500 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 GID4Q8IVV7 300 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 BBS1Q8NFJ9 593 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 OR5L1Q8NGL2 311 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 SLC25A40Q8TBP6 338 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 KLF14Q8TD94 323 aaPredicted RBP12.95□□□□□ -0.34
SF3B2-202ENST00000524475 RNF133Q8WVZ7 376 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 TRUB1Q8WWH5 349 aaKnown RBP12.95□□□□□ -0.34
SF3B2-202ENST00000524475 NEU4Q8WWR8 484 aaPredicted RBP12.95□□□□□ -0.34
SF3B2-202ENST00000524475 SLC7A6Q92536 515 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 SPTSSAQ969W0 71 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 APOBEC3DQ96AK3 386 aaPredicted RBP12.95□□□□□ -0.34
SF3B2-202ENST00000524475 OTULINQ96BN8 352 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 HRASLS5Q96KN8 279 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 RDH12Q96NR8 316 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 SORCS2Q96PQ0 1159 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 TMUB1Q9BVT8 246 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 OR2J1Q9GZK6 312 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 TOR3AQ9H497 397 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 RIBC2Q9H4K1 309 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 DYNLRB1Q9NP97 96 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 MYOZ1Q9NP98 299 aaPredicted RBP12.95□□□□□ -0.34
SF3B2-202ENST00000524475 C8orf4Q9NR00 106 aa12.95□□□□□ -0.34
SF3B2-202ENST00000524475 MED13LQ71F56 2210 aa12.94□□□□□ -0.34
SF3B2-202ENST00000524475 CCDC182A6NF36 153 aa12.94□□□□□ -0.34
SF3B2-202ENST00000524475 SLC22A31A6NKX4 558 aa12.94□□□□□ -0.34
SF3B2-202ENST00000524475 TLX2O43763 284 aaPredicted RBP12.94□□□□□ -0.34
SF3B2-202ENST00000524475 NDUFS7O75251 213 aa12.94□□□□□ -0.34
SF3B2-202ENST00000524475 DBHP09172 617 aa12.94□□□□□ -0.34
SF3B2-202ENST00000524475 ACSM4P0C7M7 580 aa12.94□□□□□ -0.34
SF3B2-202ENST00000524475 GCH1P30793 250 aa12.94□□□□□ -0.34
SF3B2-202ENST00000524475 POLR2IP36954 125 aaKnown RBP12.94□□□□□ -0.34
SF3B2-202ENST00000524475 LIPAP38571 399 aa12.94□□□□□ -0.34
SF3B2-202ENST00000524475 TPTEP56180 551 aa12.94□□□□□ -0.34
SF3B2-202ENST00000524475 KLHL12Q53G59 568 aa12.94□□□□□ -0.34
SF3B2-202ENST00000524475 FBXW12Q6X9E4 464 aa12.94□□□□□ -0.34
SF3B2-202ENST00000524475 ZBTB49Q6ZSB9 765 aa12.94□□□□□ -0.34
SF3B2-202ENST00000524475 DPY19L4Q7Z388 723 aa12.94□□□□□ -0.34
SF3B2-202ENST00000524475 ERI1Q8IV48 349 aaKnown RBP12.94□□□□□ -0.34
SF3B2-202ENST00000524475 TCEANCQ8N8B7 351 aa12.94□□□□□ -0.34
SF3B2-202ENST00000524475 OR8J1Q8NGP2 316 aa12.94□□□□□ -0.34
SF3B2-202ENST00000524475 OR6N2Q8NGY6 317 aa12.94□□□□□ -0.34
SF3B2-202ENST00000524475 OTOSQ8NHW6 89 aa12.94□□□□□ -0.34
SF3B2-202ENST00000524475 EME1Q96AY2 570 aa12.94□□□□□ -0.34
SF3B2-202ENST00000524475 ZMYND19Q96E35 227 aaPredicted RBP12.94□□□□□ -0.34
SF3B2-202ENST00000524475 TEAD3Q99594 435 aa12.94□□□□□ -0.34
SF3B2-202ENST00000524475 SYT3Q9BQG1 590 aa12.94□□□□□ -0.34
SF3B2-202ENST00000524475 OR51B6Q9H340 312 aa12.94□□□□□ -0.34
SF3B2-202ENST00000524475 DLL4Q9NR61 685 aa12.94□□□□□ -0.34
SF3B2-202ENST00000524475 HAO2Q9NYQ3 351 aa12.94□□□□□ -0.34
SF3B2-202ENST00000524475 NKIRAS2Q9NYR9 191 aa12.94□□□□□ -0.34
SF3B2-202ENST00000524475 MYEF2Q9P2K5 600 aaKnown RBP12.94□□□□□ -0.34
SF3B2-202ENST00000524475 DUSP13Q9UII6 198 aa12.94□□□□□ -0.34
SF3B2-202ENST00000524475 GRIP1Q9Y3R0 1128 aa12.94□□□□□ -0.34
SF3B2-202ENST00000524475 A0A1W2PPW3 197 aa12.93□□□□□ -0.34
SF3B2-202ENST00000524475 M0R135 149 aa12.93□□□□□ -0.34
SF3B2-202ENST00000524475 BAG2O95816 211 aa12.93□□□□□ -0.34
SF3B2-202ENST00000524475 CLPTM1O96005 669 aa12.93□□□□□ -0.34
SF3B2-202ENST00000524475 ADH4P08319 380 aa12.93□□□□□ -0.34
SF3B2-202ENST00000524475 FOSL1P15407 271 aa12.93□□□□□ -0.34
SF3B2-202ENST00000524475 KITLGP21583 273 aa12.93□□□□□ -0.34
SF3B2-202ENST00000524475 RPS27P42677 84 aaKnown RBP12.93□□□□□ -0.34
SF3B2-202ENST00000524475 SLC15A1P46059 708 aa12.93□□□□□ -0.34
SF3B2-202ENST00000524475 CDC42P60953 191 aa12.93□□□□□ -0.34
SF3B2-202ENST00000524475 GRB2P62993 217 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms