RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 EID2Q8N6I1 236 aa2.31□□□□□ -2.04
PCM1-220ENST00000523896 OR4S2Q8NH73 311 aa2.31□□□□□ -2.04
PCM1-220ENST00000523896 CXorf40AQ8TE69 158 aa2.31□□□□□ -2.04
PCM1-220ENST00000523896 BMFQ96LC9 184 aa2.31□□□□□ -2.04
PCM1-220ENST00000523896 TSNARE1Q96NA8 513 aa2.31□□□□□ -2.04
PCM1-220ENST00000523896 FOPNLQ96NB1 174 aa2.31□□□□□ -2.04
PCM1-220ENST00000523896 NOX3Q9HBY0 568 aa2.31□□□□□ -2.04
PCM1-220ENST00000523896 SLC40A1Q9NP59 571 aa2.31□□□□□ -2.04
PCM1-220ENST00000523896 OR12D3Q9UGF7 316 aa2.31□□□□□ -2.04
PCM1-220ENST00000523896 CTNNA3Q9UI47 895 aa2.31□□□□□ -2.04
PCM1-220ENST00000523896 LSM7Q9UK45 103 aaKnown RBP2.31□□□□□ -2.04
PCM1-220ENST00000523896 KIAA1257Q9ULG3 409 aa2.31□□□□□ -2.04
PCM1-220ENST00000523896 PALLDQ8WX93 1383 aa2.31□□□□□ -2.04
PCM1-220ENST00000523896 TJP1Q07157 1748 aa2.31□□□□□ -2.04
PCM1-220ENST00000523896 DLEC1Q9Y238 1755 aa2.31□□□□□ -2.04
PCM1-220ENST00000523896 IGKV2D-24A0A075B6R9 120 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 HEATR9A2RTY3 570 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 GOLGA8OA6NCC3 632 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 FAM47DPA6NHR8 397 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 F6UB75 175 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 GOLGA8NF8WBI6 632 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 INS-IGF2F8WCM5 200 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 CDC7O00311 574 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 PPP1R2P9O14990 202 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 KMOO15229 486 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 AIREO43918 545 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 SPAG7O75391 227 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 ZNF324O75467 553 aaPredicted RBP2.3□□□□□ -2.04
PCM1-220ENST00000523896 CIB2O75838 187 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 CALM1P0DP23 149 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 CALM2P0DP24 149 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 CALM3P0DP25 149 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 TROVE2P10155 538 aaKnown RBP eCLIP2.3□□□□□ -2.04
PCM1-220ENST00000523896 ZNF823P16415 610 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 AQP2P41181 271 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 TNNT2P45379 298 aaPredicted RBP2.3□□□□□ -2.04
PCM1-220ENST00000523896 CDKN1BP46527 198 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 RPS9P46781 194 aaKnown RBP2.3□□□□□ -2.04
PCM1-220ENST00000523896 CYB561P49447 251 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 ACLYP53396 1101 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 NUTF2P61970 127 aaKnown RBP2.3□□□□□ -2.04
PCM1-220ENST00000523896 CLINT1Q14677 625 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 PTGES3Q15185 160 aaKnown RBP2.3□□□□□ -2.04
PCM1-220ENST00000523896 POU2AF1Q16633 256 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 UBE2SQ16763 222 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 DUX4L9Q6RFH8 374 aaPredicted RBP2.3□□□□□ -2.04
PCM1-220ENST00000523896 C15orf56Q8N910 161 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 OR56B2PQ8NGI1 322 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 RAB3IL1Q8TBN0 382 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 PLIN2Q99541 437 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 CHAC1Q9BUX1 264 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 NUP58Q9BVL2 599 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 RACGAP1Q9H0H5 632 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 RPP21Q9H633 154 aaKnown RBP2.3□□□□□ -2.04
PCM1-220ENST00000523896 ZNF629Q9UEG4 869 aaPredicted RBP2.3□□□□□ -2.04
PCM1-220ENST00000523896 ING4Q9UNL4 249 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 MN1Q10571 1320 aaPredicted RBP2.3□□□□□ -2.04
PCM1-220ENST00000523896 COL4A5P29400 1685 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 ALPK3Q96L96 1907 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 ARID1AO14497 2285 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 SPTBN2O15020 2390 aa2.3□□□□□ -2.04
PCM1-220ENST00000523896 HELZ2Q9BYK8 2649 aaKnown RBP2.29□□□□□ -2.04
PCM1-220ENST00000523896 CEP250Q9BV73 2442 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 NSD2O96028 1365 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 IGHV5-51A0A0C4DH38 117 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 CIB4A0PJX0 185 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 SPECC1L-ADORA2AF8WAN1 911 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 DFNA5O60443 496 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 CLPXO76031 633 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 WISP3O95389 354 aaPredicted RBP2.29□□□□□ -2.04
PCM1-220ENST00000523896 RAB3DO95716 219 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 AIFM1O95831 613 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 TSPAN13O95857 204 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 TLX1NBP0CAT3 122 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 IGFBP3P17936 291 aaPredicted RBP2.29□□□□□ -2.04
PCM1-220ENST00000523896 ACTA2P62736 377 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 ACTG2P63267 376 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 ACTC1P68032 377 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 XKR7Q5GH72 579 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 HES5Q5TA89 166 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 SPECC1LQ69YQ0 1117 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 ANKRD26P1Q6NSI1 321 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 CERS6Q6ZMG9 384 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 TEX43Q6ZNM6 134 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 FAM92BQ6ZTR7 304 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 HDDC2Q7Z4H3 204 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 LIX1Q8N485 282 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 FAM86B1Q8N7N1 296 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 CYB561D1Q8N8Q1 229 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 FBXL13Q8NEE6 735 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 OR7G2Q8NG99 324 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 OR10G2Q8NGC3 310 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 N4BP2L2Q92802 583 aaPredicted RBP2.29□□□□□ -2.04
PCM1-220ENST00000523896 FAM3DQ96BQ1 224 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 CCDC126Q96EE4 140 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 PKNOX2Q96KN3 472 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 ATP5SQ99766 215 aa2.29□□□□□ -2.04
PCM1-220ENST00000523896 CCDC77Q9BR77 488 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms