RNA–Protein interactions for RNA: ENST00000523004.1

GM2A-202, Transcript of GM2 ganglioside activator, humanhuman

TSL 1 (best)

Gene GM2A, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-202ENST00000523004 ZNF665Q9H7R5 613 aa6.72□□□□□ -1.33
GM2A-202ENST00000523004 HINT3Q9NQE9 182 aaKnown RBP6.72□□□□□ -1.33
GM2A-202ENST00000523004 PLCXD1Q9NUJ7 323 aa6.72□□□□□ -1.33
GM2A-202ENST00000523004 TMEM38BQ9NVV0 291 aa6.72□□□□□ -1.33
GM2A-202ENST00000523004 CNOT2Q9NZN8 540 aaKnown RBP6.72□□□□□ -1.33
GM2A-202ENST00000523004 WARS2Q9UGM6 360 aaKnown RBP6.72□□□□□ -1.33
GM2A-202ENST00000523004 PKD1L1Q8TDX9 2849 aa6.72□□□□□ -1.33
GM2A-202ENST00000523004 LOC105371242A0A075B767 164 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 IGHV1-69-2A0A0G2JMI3 117 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 A0A0G2JMP0 313 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 A0A0X1KG70 313 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 ZAR1LA6NP61 321 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 PTGES3LE9PB15 166 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 H3BN98 237 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 TRIM77I1YAP6 450 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 M0R3H8 397 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 PLPP2O43688 288 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 CHP2O43745 196 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 CDC14BO60729 498 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 RGS9O75916 674 aaPredicted RBP6.71□□□□□ -1.34
GM2A-202ENST00000523004 OR6A2O95222 327 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 LYPD3O95274 346 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 MPZL1O95297 269 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 FARS2O95363 451 aaKnown RBP6.71□□□□□ -1.34
GM2A-202ENST00000523004 CH25HO95992 272 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 PTHP01270 115 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 THY1P04216 161 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 QDPRP09417 244 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 PGA4P0DJD7 388 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 PGA3P0DJD8 388 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 CCL2P13500 99 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 RAD52P43351 418 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 CRISP1P54107 249 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 UCP2P55851 309 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 ERVS71-1P61550 626 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 SLC35A2P78381 396 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.71□□□□□ -1.34
GM2A-202ENST00000523004 TBCEQ15813 527 aaPredicted RBP6.71□□□□□ -1.34
GM2A-202ENST00000523004 ZNF74Q16587 644 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 HIST3H3Q16695 136 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 ALKBH6Q3KRA9 238 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 NRN1LQ496H8 165 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 ZNF770Q6IQ21 691 aaPredicted RBP6.71□□□□□ -1.34
GM2A-202ENST00000523004 RPL13AP3Q6NVV1 102 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 TMEM53Q6P2H8 277 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 ZNF730Q6ZMV8 503 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 PTCHD4Q6ZW05 846 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 C1QL2Q7Z5L3 287 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 SPARTQ8N0X7 666 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 LRRC17Q8N6Y2 441 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 OR4M2Q8NGB6 313 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 OR4K5Q8NGD3 323 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 OR9Q2Q8NGE9 314 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 OR6T1Q8NGN1 323 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 OR8J1Q8NGP2 316 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 CNIH3Q8TBE1 160 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 TEX47Q8TBZ9 253 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 GNPDA2Q8TDQ7 276 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 ACOT11Q8WXI4 607 aaPredicted RBP6.71□□□□□ -1.34
GM2A-202ENST00000523004 MUL1Q969V5 352 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 ISOC1Q96CN7 298 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 NMD3Q96D46 503 aaKnown RBP6.71□□□□□ -1.34
GM2A-202ENST00000523004 RAB39BQ96DA2 213 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 JMJD8Q96S16 334 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 COPS4Q9BT78 406 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 BCL2L14Q9BZR8 327 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 CDH20Q9HBT6 801 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 SLCO1C1Q9NYB5 712 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 TMEM5Q9Y2B1 443 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 WIPI2Q9Y4P8 454 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 CEPT1Q9Y6K0 416 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 TRRAPQ9Y4A5 3859 aa6.71□□□□□ -1.34
GM2A-202ENST00000523004 TANC2Q9HCD6 1990 aa6.7□□□□□ -1.34
GM2A-202ENST00000523004 TRBV4-1A0A0J9YWV2 114 aa6.7□□□□□ -1.34
GM2A-202ENST00000523004 TRAPPC13A5PLN9 417 aa6.7□□□□□ -1.34
GM2A-202ENST00000523004 HTR3EA5X5Y0 456 aa6.7□□□□□ -1.34
GM2A-202ENST00000523004 E9PQ18 207 aa6.7□□□□□ -1.34
GM2A-202ENST00000523004 J3KTA2 159 aa6.7□□□□□ -1.34
GM2A-202ENST00000523004 J3QLI3 93 aa6.7□□□□□ -1.34
GM2A-202ENST00000523004 FFAR1O14842 300 aa6.7□□□□□ -1.34
GM2A-202ENST00000523004 SLC22A1O15245 554 aa6.7□□□□□ -1.34
GM2A-202ENST00000523004 RNF13O43567 381 aa6.7□□□□□ -1.34
GM2A-202ENST00000523004 IGHV3-13P01766 116 aa6.7□□□□□ -1.34
GM2A-202ENST00000523004 IGHV2-5P01817 119 aa6.7□□□□□ -1.34
GM2A-202ENST00000523004 LCKP06239 509 aa6.7□□□□□ -1.34
GM2A-202ENST00000523004 ASAH2BP0C7U1 165 aa6.7□□□□□ -1.34
GM2A-202ENST00000523004 PIPP12273 146 aaPredicted RBP6.7□□□□□ -1.34
GM2A-202ENST00000523004 GATA3P23771 443 aa6.7□□□□□ -1.34
GM2A-202ENST00000523004 FPR3P25089 353 aa6.7□□□□□ -1.34
GM2A-202ENST00000523004 CALRP27797 417 aaKnown RBP6.7□□□□□ -1.34
GM2A-202ENST00000523004 POU1F1P28069 291 aa6.7□□□□□ -1.34
GM2A-202ENST00000523004 SERPINB10P48595 397 aa6.7□□□□□ -1.34
GM2A-202ENST00000523004 SNRPGP62308 76 aaKnown RBP6.7□□□□□ -1.34
GM2A-202ENST00000523004 LSAMPQ13449 338 aa6.7□□□□□ -1.34
GM2A-202ENST00000523004 PIN1Q13526 163 aaPredicted RBP6.7□□□□□ -1.34
GM2A-202ENST00000523004 MELKQ14680 651 aa6.7□□□□□ -1.34
GM2A-202ENST00000523004 PTGES3Q15185 160 aaKnown RBP6.7□□□□□ -1.34
GM2A-202ENST00000523004 NPTX1Q15818 432 aa6.7□□□□□ -1.34
GM2A-202ENST00000523004 MOGQ16653 247 aa6.7□□□□□ -1.34
GM2A-202ENST00000523004 TBC1D28Q2M2D7 210 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms