RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 SLC37A3Q8NCC5 494 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 OR52L1Q8NGH7 329 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 OR9Q1Q8NGQ5 310 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 OR51A7Q8NH64 312 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 RFKQ969G6 155 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 SLC35B4Q969S0 331 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 TMEM203Q969S6 136 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 ADIPOR1Q96A54 375 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 OTULINQ96BN8 352 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 EFHD2Q96C19 240 aaPredicted RBP6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 ZNF524Q96C55 264 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 SGTBQ96EQ0 304 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 SFXN2Q96NB2 322 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 KLHDC3Q9BQ90 382 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 IFT27Q9BW83 186 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 JAM3Q9BX67 310 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 HDHD5Q9BXW7 423 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 C6orf62Q9GZU0 229 aaPredicted RBP6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 WWTR1Q9GZV5 400 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 NXF5Q9H1B4 397 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 FN3KQ9H479 309 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 SIAEQ9HAT2 523 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 SMURF1Q9HCE7 757 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 GALNT9Q9HCQ5 603 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 MYOZ1Q9NP98 299 aaPredicted RBP6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 CMC2Q9NRP2 79 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 SNTG1Q9NSN8 517 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 TBCCD1Q9NVR7 557 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 TXNL4BQ9NX01 149 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 ERVK13-1Q9NX77 482 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 RPS6KB2Q9UBS0 482 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 DAPK2Q9UIK4 370 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 FBXL2Q9UKC9 423 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 GRIP1Q9Y3R0 1128 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 FKBP7Q9Y680 259 aa6.28□□□□□ -1.4
CTNNA1-227ENST00000521387 HERC1Q15751 4861 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 A0A087WUJ7 227 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 RBMY1BA6NDE4 496 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 RBMY1EA6NEQ0 496 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 LRRN3E7EW58 273 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 PRR23D1E9PI22 279 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 TP53I11O14683 189 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 WNT9BO14905 357 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 PFDN1O60925 122 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 ICOSLGO75144 302 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 REM1O75628 298 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 CBR3O75828 277 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 OR7A10O76100 309 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 CDRT1O95170 752 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 UTS2O95399 124 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 PNPP00491 289 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 RBMY1DP0C7P1 496 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 PRR23D2P0DMB1 279 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 SAGP10523 405 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 CLUP10909 449 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 HK1P19367 917 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 SLC2A5P22732 501 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 PSMA1P25786 263 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 NOS3P29474 1203 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 TNFSF8P32971 234 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 SOX6P35712 828 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 CLDN20P56880 219 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 FABP5Q01469 135 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 OXA1LQ15070 435 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 EBPQ15125 230 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 CD226Q15762 336 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 TAF9Q16594 264 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 CASC10Q5T4H9 136 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 C22orf42Q6IC83 251 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 RPL13AP3Q6NVV1 102 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 ULK3Q6PHR2 472 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 ZNF322Q6U7Q0 402 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 CHMP1BQ7LBR1 199 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 OAFQ86UD1 273 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 CCDC190Q86UF4 302 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 LYSMD2Q8IV50 215 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 GID4Q8IVV7 300 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 ZNF440Q8IYI8 595 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 PRR22Q8IZ63 422 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 KLHL36Q8N4N3 616 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 PARP16Q8N5Y8 322 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 CYB561A3Q8NBI2 242 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 FAM71CQ8NEG0 241 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 OR51G2Q8NGK0 314 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 OR52N1Q8NH53 320 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 UFD1Q92890 307 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 KISS1RQ969F8 398 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 C1GALT1C1Q96EU7 318 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 RADILQ96JH8 1075 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 GAL3ST4Q96RP7 486 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 TBX5Q99593 518 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 TEAD3Q99594 435 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 SDHCQ99643 169 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 POTEKPQ9BYX7 375 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 HOXD1Q9GZZ0 328 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 NUAK2Q9H093 628 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 ISG20L2Q9H9L3 353 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 POLE4Q9NR33 117 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 ABCB10Q9NRK6 738 aa6.27□□□□□ -1.41
CTNNA1-227ENST00000521387 NECAP2Q9NVZ3 263 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms