RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 LRRC29Q8WV35 223 aa2.94□□□□□ -1.94
NPM1-206ENST00000519955 TCEAL3Q969E4 200 aa2.94□□□□□ -1.94
NPM1-206ENST00000519955 MCUR1Q96AQ8 359 aa2.94□□□□□ -1.94
NPM1-206ENST00000519955 DCPSQ96C86 337 aaKnown RBP2.94□□□□□ -1.94
NPM1-206ENST00000519955 ECHDC3Q96DC8 303 aa2.94□□□□□ -1.94
NPM1-206ENST00000519955 NEURL3Q96EH8 262 aa2.94□□□□□ -1.94
NPM1-206ENST00000519955 CHP1Q99653 195 aa2.94□□□□□ -1.94
NPM1-206ENST00000519955 HSD17B10Q99714 261 aaKnown RBP2.94□□□□□ -1.94
NPM1-206ENST00000519955 OSBPL11Q9BXB4 747 aa2.94□□□□□ -1.94
NPM1-206ENST00000519955 FAM192AQ9GZU8 254 aa2.94□□□□□ -1.94
NPM1-206ENST00000519955 ING2Q9H160 280 aa2.94□□□□□ -1.94
NPM1-206ENST00000519955 SLC17A4Q9Y2C5 497 aa2.94□□□□□ -1.94
NPM1-206ENST00000519955 NINLQ9Y2I6 1382 aa2.94□□□□□ -1.94
NPM1-206ENST00000519955 KIF26AQ9ULI4 1882 aaPredicted RBP2.94□□□□□ -1.94
NPM1-206ENST00000519955 TNS2Q63HR2 1409 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 IGLV3-12A0A075B6K2 115 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 TRAV6A0A075B6T7 132 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 OR2AG2A6NM03 316 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 DNASE2O00115 360 aaPredicted RBP2.93□□□□□ -1.94
NPM1-206ENST00000519955 RAD51CO43502 376 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 AQP8O94778 261 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 CCNE2O96020 404 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 IGLV3-19P01714 112 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 SLC11A1P49279 550 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 MRPL19P49406 292 aaKnown RBP2.93□□□□□ -1.94
NPM1-206ENST00000519955 CDKN2DP55273 166 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 C21orf59P57076 290 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 SYNJ2BPP57105 145 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 CDC20Q12834 499 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 IFT88Q13099 833 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 KIR2DS1Q14954 304 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 SNRNP35Q16560 246 aaKnown RBP2.93□□□□□ -1.94
NPM1-206ENST00000519955 AP1ARQ63HQ0 302 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 SAXO2Q658L1 398 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 SLC16A13Q7RTY0 426 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 WDFY1Q8IWB7 410 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 OR52E2Q8NGJ4 325 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 LYPD6BQ8NI32 183 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 LINC01560Q8TB33 94 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 NUBPLQ8TB37 319 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 APH1BQ8WW43 257 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 RTBDNQ9BSG5 229 aaPredicted RBP2.93□□□□□ -1.94
NPM1-206ENST00000519955 ANKRD60Q9BZ19 345 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 OR52D1Q9H346 318 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 TMEM185BQ9H7F4 350 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 EDA2RQ9HAV5 297 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 RABL2BQ9UNT1 228 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 CABIN1Q9Y6J0 2220 aa2.93□□□□□ -1.94
NPM1-206ENST00000519955 COL1A2P08123 1366 aa2.92□□□□□ -1.94
NPM1-206ENST00000519955 PALLDQ8WX93 1383 aa2.92□□□□□ -1.94
NPM1-206ENST00000519955 CTAGE15A4D2H0 777 aa2.92□□□□□ -1.94
NPM1-206ENST00000519955 H7C0C1 242 aa2.92□□□□□ -1.94
NPM1-206ENST00000519955 EIF3HO15372 352 aaKnown RBP eCLIP2.92□□□□□ -1.94
NPM1-206ENST00000519955 HUS1O60921 280 aa2.92□□□□□ -1.94
NPM1-206ENST00000519955 OR2F2O95006 317 aa2.92□□□□□ -1.94
NPM1-206ENST00000519955 SEMA3DO95025 777 aa2.92□□□□□ -1.94
NPM1-206ENST00000519955 CD74P04233 296 aa2.92□□□□□ -1.94
NPM1-206ENST00000519955 ZNF14P17017 642 aaPredicted RBP2.92□□□□□ -1.94
NPM1-206ENST00000519955 GTF2E2P29084 291 aaKnown RBP2.92□□□□□ -1.94
NPM1-206ENST00000519955 ATP5OP48047 213 aa2.92□□□□□ -1.94
NPM1-206ENST00000519955 PITPNAQ00169 270 aa2.92□□□□□ -1.94
NPM1-206ENST00000519955 LIPEQ05469 1076 aa2.92□□□□□ -1.94
NPM1-206ENST00000519955 SPANXN2Q5MJ10 180 aa2.92□□□□□ -1.94
NPM1-206ENST00000519955 MBOAT2Q6ZWT7 520 aa2.92□□□□□ -1.94
NPM1-206ENST00000519955 MRPL55Q7Z7F7 128 aaKnown RBP2.92□□□□□ -1.94
NPM1-206ENST00000519955 SCD5Q86SK9 330 aa2.92□□□□□ -1.94
NPM1-206ENST00000519955 CTAGE6Q86UF2 777 aa2.92□□□□□ -1.94
NPM1-206ENST00000519955 GATSQ8NAP1 163 aa2.92□□□□□ -1.94
NPM1-206ENST00000519955 OR6N1Q8NGY5 312 aa2.92□□□□□ -1.94
NPM1-206ENST00000519955 OR52P1PQ8NH57 321 aa2.92□□□□□ -1.94
NPM1-206ENST00000519955 OR5K2Q8NHB8 316 aa2.92□□□□□ -1.94
NPM1-206ENST00000519955 FAM81AQ8TBF8 368 aa2.92□□□□□ -1.94
NPM1-206ENST00000519955 ZNF488Q96MN9 340 aa2.92□□□□□ -1.94
NPM1-206ENST00000519955 C1orf198Q9H425 327 aa2.92□□□□□ -1.94
NPM1-206ENST00000519955 LYARQ9NX58 379 aaKnown RBP2.92□□□□□ -1.94
NPM1-206ENST00000519955 MARCOQ9UEW3 520 aaPredicted RBP2.92□□□□□ -1.94
NPM1-206ENST00000519955 TSSC4Q9Y5U2 329 aaPredicted RBP2.92□□□□□ -1.94
NPM1-206ENST00000519955 PCM1Q15154 2024 aa2.92□□□□□ -1.94
NPM1-206ENST00000519955 COL22A1Q8NFW1 1626 aaPredicted RBP2.91□□□□□ -1.94
NPM1-206ENST00000519955 TRAV19A0A0A6YYK7 116 aa2.91□□□□□ -1.94
NPM1-206ENST00000519955 ZNF850A8MQ14 1090 aa2.91□□□□□ -1.94
NPM1-206ENST00000519955 RPL36A-HNRNPH2H7BZ11 118 aa2.91□□□□□ -1.94
NPM1-206ENST00000519955 REM1O75628 298 aa2.91□□□□□ -1.94
NPM1-206ENST00000519955 SLC22A5O76082 557 aa2.91□□□□□ -1.94
NPM1-206ENST00000519955 IL4P05112 153 aa2.91□□□□□ -1.94
NPM1-206ENST00000519955 DCNP07585 359 aaKnown RBP2.91□□□□□ -1.94
NPM1-206ENST00000519955 OR8U9P0C7N5 309 aa2.91□□□□□ -1.94
NPM1-206ENST00000519955 ZNF688P0C7X2 276 aa2.91□□□□□ -1.94
NPM1-206ENST00000519955 RPS15P62841 145 aaKnown RBP2.91□□□□□ -1.94
NPM1-206ENST00000519955 CCNA1P78396 465 aa2.91□□□□□ -1.94
NPM1-206ENST00000519955 PIGHQ14442 188 aaPredicted RBP2.91□□□□□ -1.94
NPM1-206ENST00000519955 RCN1Q15293 331 aa2.91□□□□□ -1.94
NPM1-206ENST00000519955 HSDL1Q3SXM5 330 aa2.91□□□□□ -1.94
NPM1-206ENST00000519955 ZFP1Q6P2D0 407 aa2.91□□□□□ -1.94
NPM1-206ENST00000519955 BBS5Q8N3I7 341 aa2.91□□□□□ -1.94
NPM1-206ENST00000519955 OR9A2Q8NGT5 310 aa2.91□□□□□ -1.94
NPM1-206ENST00000519955 RMI2Q96E14 147 aa2.91□□□□□ -1.94
NPM1-206ENST00000519955 WFDC1Q9HC57 220 aa2.91□□□□□ -1.94
NPM1-206ENST00000519955 IGKV1D-17A0A075B6S4 117 aa2.9□□□□□ -1.95
NPM1-206ENST00000519955 A0A1B0GW55 424 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms