RNA–Protein interactions for RNA: ENST00000519120.1

MRPS28-204, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-204ENST00000519120 SPRNQ5BIV9 151 aa13.32□□□□□ -0.28
MRPS28-204ENST00000519120 COLCA1Q6ZS62 124 aa13.32□□□□□ -0.28
MRPS28-204ENST00000519120 RNF148Q8N7C7 305 aa13.32□□□□□ -0.28
MRPS28-204ENST00000519120 SLC26A10Q8NG04 563 aa13.32□□□□□ -0.28
MRPS28-204ENST00000519120 NANPQ8TBE9 248 aa13.32□□□□□ -0.28
MRPS28-204ENST00000519120 FANK1Q8TC84 345 aa13.32□□□□□ -0.28
MRPS28-204ENST00000519120 NSMCE2Q96MF7 247 aa13.32□□□□□ -0.28
MRPS28-204ENST00000519120 ERMAPQ96PL5 475 aaPredicted RBP13.32□□□□□ -0.28
MRPS28-204ENST00000519120 JMJD8Q96S16 334 aa13.32□□□□□ -0.28
MRPS28-204ENST00000519120 IL1RAPQ9NPH3 570 aa13.32□□□□□ -0.28
MRPS28-204ENST00000519120 NDE1Q9NXR1 346 aa13.32□□□□□ -0.28
MRPS28-204ENST00000519120 PCDHB10Q9UN67 800 aa13.32□□□□□ -0.28
MRPS28-204ENST00000519120 B9D1Q9UPM9 204 aa13.32□□□□□ -0.28
MRPS28-204ENST00000519120 POLR1DQ9Y2S0 133 aa13.32□□□□□ -0.28
MRPS28-204ENST00000519120 LHFPL6Q9Y693 200 aa13.32□□□□□ -0.28
MRPS28-204ENST00000519120 DCTN6O00399 190 aa13.31□□□□□ -0.28
MRPS28-204ENST00000519120 PPP1R3DO95685 299 aa13.31□□□□□ -0.28
MRPS28-204ENST00000519120 RENP00797 406 aa13.31□□□□□ -0.28
MRPS28-204ENST00000519120 FSHBP01225 129 aa13.31□□□□□ -0.28
MRPS28-204ENST00000519120 FABP3P05413 133 aa13.31□□□□□ -0.28
MRPS28-204ENST00000519120 GSSP48637 474 aa13.31□□□□□ -0.28
MRPS28-204ENST00000519120 SPIBQ01892 262 aa13.31□□□□□ -0.28
MRPS28-204ENST00000519120 SLC36A3Q495N2 470 aa13.31□□□□□ -0.28
MRPS28-204ENST00000519120 C1orf94Q6P1W5 598 aa13.31□□□□□ -0.28
MRPS28-204ENST00000519120 CPLX4Q7Z7G2 160 aa13.31□□□□□ -0.28
MRPS28-204ENST00000519120 ZBTB46Q86UZ6 589 aa13.31□□□□□ -0.28
MRPS28-204ENST00000519120 JAZF1Q86VZ6 243 aa13.31□□□□□ -0.28
MRPS28-204ENST00000519120 LRRC28Q86X40 367 aaPredicted RBP13.31□□□□□ -0.28
MRPS28-204ENST00000519120 KLHL36Q8N4N3 616 aa13.31□□□□□ -0.28
MRPS28-204ENST00000519120 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.31□□□□□ -0.28
MRPS28-204ENST00000519120 SLC7A6Q92536 515 aa13.31□□□□□ -0.28
MRPS28-204ENST00000519120 TSSK2Q96PF2 358 aa13.31□□□□□ -0.28
MRPS28-204ENST00000519120 SIGLEC11Q96RL6 698 aa13.31□□□□□ -0.28
MRPS28-204ENST00000519120 FAM107BQ9H098 131 aa13.31□□□□□ -0.28
MRPS28-204ENST00000519120 PATZ1Q9HBE1 687 aaKnown RBP13.31□□□□□ -0.28
MRPS28-204ENST00000519120 UBAP1Q9NZ09 502 aa13.31□□□□□ -0.28
MRPS28-204ENST00000519120 PPP1R3CQ9UQK1 317 aa13.31□□□□□ -0.28
MRPS28-204ENST00000519120 A0A1B0GWJ7 208 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 A8MXK9 166 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 HAX1O00165 279 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 ARPC2O15144 300 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 OR10H3O60404 316 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 FSTL3O95633 263 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 DBHP09172 617 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 BTG1P62324 171 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 TSPAN31Q12999 210 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 ECH1Q13011 328 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 KRTAP27-1Q3LI81 207 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 LEG1Q6P5S2 330 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 ZNF620Q6ZNG0 422 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 OR6V1Q8N148 313 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 MUC20Q8N307 709 aaPredicted RBP13.3□□□□□ -0.28
MRPS28-204ENST00000519120 OR8G5Q8NG78 346 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 OR13G1Q8NGZ3 307 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 FAM216AQ8WUB2 273 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 ITLN1Q8WWA0 313 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 OR2V2Q96R30 315 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 NMNAT3Q96T66 252 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 SUCNR1Q9BXA5 334 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 C7orf69Q9H7B7 122 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 DCAF16Q9NXF7 216 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 OPN4Q9UHM6 478 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 TAGLN3Q9UI15 199 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 KCNG2Q9UJ96 466 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 TMCC3Q9ULS5 477 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 V9GYQ6 96 aa13.3□□□□□ -0.28
MRPS28-204ENST00000519120 IQCF6A8MYZ5 107 aa13.29□□□□□ -0.28
MRPS28-204ENST00000519120 F5H0A9 414 aaPredicted RBP13.29□□□□□ -0.28
MRPS28-204ENST00000519120 KRT36O76013 467 aa13.29□□□□□ -0.28
MRPS28-204ENST00000519120 SBK2P0C263 348 aa13.29□□□□□ -0.28
MRPS28-204ENST00000519120 HIST1H1CP16403 213 aaKnown RBP13.29□□□□□ -0.28
MRPS28-204ENST00000519120 SELEP16581 610 aa13.29□□□□□ -0.28
MRPS28-204ENST00000519120 ADRA2CP18825 462 aa13.29□□□□□ -0.28
MRPS28-204ENST00000519120 SLC6A9P48067 706 aa13.29□□□□□ -0.28
MRPS28-204ENST00000519120 COMPP49747 757 aaPredicted RBP13.29□□□□□ -0.28
MRPS28-204ENST00000519120 ERFP50548 548 aa13.29□□□□□ -0.28
MRPS28-204ENST00000519120 HMGA2P52926 109 aa13.29□□□□□ -0.28
MRPS28-204ENST00000519120 LCN2P80188 198 aa13.29□□□□□ -0.28
MRPS28-204ENST00000519120 ZNF181Q2M3W8 571 aa13.29□□□□□ -0.28
MRPS28-204ENST00000519120 OTPQ5XKR4 325 aa13.29□□□□□ -0.28
MRPS28-204ENST00000519120 RPL13AP3Q6NVV1 102 aa13.29□□□□□ -0.28
MRPS28-204ENST00000519120 C16orf89Q6UX73 402 aa13.29□□□□□ -0.28
MRPS28-204ENST00000519120 LINC00471Q8N535 108 aa13.29□□□□□ -0.28
MRPS28-204ENST00000519120 GNPDA2Q8TDQ7 276 aa13.29□□□□□ -0.28
MRPS28-204ENST00000519120 POP5Q969H6 163 aaKnown RBP13.29□□□□□ -0.28
MRPS28-204ENST00000519120 ZNF582Q96NG8 517 aaPredicted RBP13.29□□□□□ -0.28
MRPS28-204ENST00000519120 CDRT15Q96T59 188 aa13.29□□□□□ -0.28
MRPS28-204ENST00000519120 SLC30A2Q9BRI3 323 aa13.29□□□□□ -0.28
MRPS28-204ENST00000519120 IFT27Q9BW83 186 aa13.29□□□□□ -0.28
MRPS28-204ENST00000519120 RBM4Q9BWF3 364 aaKnown RBP13.29□□□□□ -0.28
MRPS28-204ENST00000519120 C1QTNF5Q9BXJ0 243 aa13.29□□□□□ -0.28
MRPS28-204ENST00000519120 GCM1Q9NP62 436 aa13.29□□□□□ -0.28
MRPS28-204ENST00000519120 ARL2BPQ9Y2Y0 163 aa13.29□□□□□ -0.28
MRPS28-204ENST00000519120 ANK2Q01484 3957 aa13.29□□□□□ -0.28
MRPS28-204ENST00000519120 TMEM178BH3BS89 294 aa13.28□□□□□ -0.28
MRPS28-204ENST00000519120 TRIM77I1YAP6 450 aa13.28□□□□□ -0.28
MRPS28-204ENST00000519120 DCTN3O75935 186 aa13.28□□□□□ -0.28
MRPS28-204ENST00000519120 ZFP36P26651 326 aaKnown RBP13.28□□□□□ -0.28
MRPS28-204ENST00000519120 NOS3P29474 1203 aa13.28□□□□□ -0.28
MRPS28-204ENST00000519120 RRM2P31350 389 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms