RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 HYLS1Q96M11 299 aa13.05□□□□□ -0.32
TRIO-222ENST00000515144 PBDC1Q9BVG4 233 aa13.05□□□□□ -0.32
TRIO-222ENST00000515144 MPDZO75970 2070 aa13.05□□□□□ -0.32
TRIO-222ENST00000515144 H0Y8G0 127 aa13.05□□□□□ -0.32
TRIO-222ENST00000515144 ZMAT1Q5H9K5 638 aa13.05□□□□□ -0.32
TRIO-222ENST00000515144 H2BFWTQ7Z2G1 175 aa13.05□□□□□ -0.32
TRIO-222ENST00000515144 ZNF454Q8N9F8 522 aa13.05□□□□□ -0.32
TRIO-222ENST00000515144 NRIP3Q9NQ35 241 aa13.05□□□□□ -0.32
TRIO-222ENST00000515144 MBD1Q9UIS9 605 aaPredicted RBP13.05□□□□□ -0.32
TRIO-222ENST00000515144 UBALD1Q8TB05 177 aa13.05□□□□□ -0.32
TRIO-222ENST00000515144 COL6A6A6NMZ7 2263 aa13.05□□□□□ -0.32
TRIO-222ENST00000515144 MGST1P10620 155 aaKnown RBP13.05□□□□□ -0.32
TRIO-222ENST00000515144 CYCSP99999 105 aaKnown RBP13.05□□□□□ -0.32
TRIO-222ENST00000515144 SCGB2A2Q13296 93 aa13.05□□□□□ -0.32
TRIO-222ENST00000515144 CPNE4Q96A23 557 aaPredicted RBP13.05□□□□□ -0.32
TRIO-222ENST00000515144 MALSU1Q96EH3 234 aa13.05□□□□□ -0.32
TRIO-222ENST00000515144 EVA1AQ9H8M9 152 aa13.05□□□□□ -0.32
TRIO-222ENST00000515144 OSGIN1Q9UJX0 560 aa13.05□□□□□ -0.32
TRIO-222ENST00000515144 CSF3P09919 207 aa13.04□□□□□ -0.32
TRIO-222ENST00000515144 GPR12P47775 334 aa13.04□□□□□ -0.32
TRIO-222ENST00000515144 RTL6Q6ICC9 239 aa13.04□□□□□ -0.32
TRIO-222ENST00000515144 FAM60AQ9NP50 221 aa13.04□□□□□ -0.32
TRIO-222ENST00000515144 AHCTF1Q8WYP5 2266 aa13.04□□□□□ -0.32
TRIO-222ENST00000515144 FZD5Q13467 585 aa13.04□□□□□ -0.32
TRIO-222ENST00000515144 TMEM104Q8NE00 496 aa13.04□□□□□ -0.32
TRIO-222ENST00000515144 ANKRD60Q9BZ19 345 aa13.04□□□□□ -0.32
TRIO-222ENST00000515144 POFUT1Q9H488 388 aa13.04□□□□□ -0.32
TRIO-222ENST00000515144 NDRG4Q9ULP0 352 aaKnown RBP13.04□□□□□ -0.32
TRIO-222ENST00000515144 ZNF646O15015 1829 aaPredicted RBP13.04□□□□□ -0.32
TRIO-222ENST00000515144 OPRM1P35372 400 aa13.04□□□□□ -0.32
TRIO-222ENST00000515144 PRSS12P56730 875 aa13.04□□□□□ -0.32
TRIO-222ENST00000515144 CLINT1Q14677 625 aa13.04□□□□□ -0.32
TRIO-222ENST00000515144 LINC00615Q96LM1 132 aaPredicted RBP13.04□□□□□ -0.32
TRIO-222ENST00000515144 HRH4Q9H3N8 390 aa13.04□□□□□ -0.32
TRIO-222ENST00000515144 OR13C5Q8NGS8 318 aa13.04□□□□□ -0.32
TRIO-222ENST00000515144 ELMOD3Q96FG2 381 aa13.04□□□□□ -0.32
TRIO-222ENST00000515144 PPA2Q9H2U2 334 aa13.04□□□□□ -0.32
TRIO-222ENST00000515144 CCL21O00585 134 aa13.04□□□□□ -0.32
TRIO-222ENST00000515144 RBP2P50120 134 aa13.04□□□□□ -0.32
TRIO-222ENST00000515144 TAS2R31P59538 309 aa13.04□□□□□ -0.32
TRIO-222ENST00000515144 HTD2P86397 168 aa13.04□□□□□ -0.32
TRIO-222ENST00000515144 LRRC28Q86X40 367 aaPredicted RBP13.04□□□□□ -0.32
TRIO-222ENST00000515144 FUNDC1Q8IVP5 155 aa13.04□□□□□ -0.32
TRIO-222ENST00000515144 ZDHHC23Q8IYP9 409 aa13.04□□□□□ -0.32
TRIO-222ENST00000515144 MRPS24Q96EL2 167 aaKnown RBP13.04□□□□□ -0.32
TRIO-222ENST00000515144 OR2B2Q9GZK3 357 aa13.04□□□□□ -0.32
TRIO-222ENST00000515144 HINT3Q9NQE9 182 aaKnown RBP13.04□□□□□ -0.32
TRIO-222ENST00000515144 KCNE3Q9Y6H6 103 aa13.04□□□□□ -0.32
TRIO-222ENST00000515144 GPR37O15354 613 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 SPRY1O43609 319 aaPredicted RBP13.03□□□□□ -0.32
TRIO-222ENST00000515144 RAB1AP62820 205 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 MRGPRX3Q96LB0 322 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 NMNAT2Q9BZQ4 307 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 C3orf80F5H4A9 247 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 SSX2Q16385 188 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 BRICD5Q6PL45 260 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 CYHR1Q6ZMK1 362 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 AP1S3Q96PC3 154 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 CENPOQ9BU64 300 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 TNFRSF12AQ9NP84 129 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 NECAP2Q9NVZ3 263 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 RABL2AQ9UBK7 228 aaPredicted RBP13.03□□□□□ -0.32
TRIO-222ENST00000515144 PRDM4Q9UKN5 801 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 RABL2BQ9UNT1 228 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 ZNF816-ZNF321PA0A0X1KG74 233 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 RGS11O94810 467 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 ZNF728P0DKX0 622 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 ARL16Q0P5N6 197 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 EIF3IQ13347 325 aaKnown RBP13.03□□□□□ -0.32
TRIO-222ENST00000515144 HABP2Q14520 560 aaPredicted RBP13.03□□□□□ -0.32
TRIO-222ENST00000515144 DESI1Q6ICB0 168 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 OR2A2Q6IF42 318 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 TMEM99Q8N816 258 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 ZNF321PQ8N8H1 164 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 HAVCR2Q8TDQ0 301 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 CHST6Q9GZX3 395 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 ALPK2Q86TB3 2170 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 THBS1P07996 1170 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 ZNF696Q9H7X3 374 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 MMP25Q9NPA2 562 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 PTPRFP10586 1907 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 IL1AP01583 271 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 DPPA2Q7Z7J5 298 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 OR51D1Q8NGF3 324 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 OR2T35Q8NGX2 323 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 EXTL1Q92935 676 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 FN3KRPQ9HA64 309 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 POM121CA8CG34 1229 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 MAGEA5P43359 124 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 ETV1P50549 477 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 NXPH1P58417 271 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 TRA2AQ13595 282 aaKnown RBP eCLIP13.03□□□□□ -0.32
TRIO-222ENST00000515144 SLC43A2Q8N370 569 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 FAM3DQ96BQ1 224 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 MRGPRX4Q96LA9 322 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 C1orf123Q9NWV4 160 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 EXO1Q9UQ84 846 aaKnown RBP13.03□□□□□ -0.32
TRIO-222ENST00000515144 GPR55Q9Y2T6 319 aaPredicted RBP13.03□□□□□ -0.32
TRIO-222ENST00000515144 NUBP2Q9Y5Y2 271 aa13.03□□□□□ -0.32
TRIO-222ENST00000515144 PHF3Q92576 2039 aaKnown RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms