RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 CSNK1G2P78368 415 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 C17orf67Q0P5P2 114 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 CDK5R1Q15078 307 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 SPANXN5Q5MJ07 72 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 FCRL6Q6DN72 434 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 LYG2Q86SG7 212 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 MARCH1Q8TCQ1 289 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 C2orf50Q96LR7 162 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 R3HDMLQ9H3Y0 253 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 C12orf10Q9HB07 376 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 SSUH2Q9Y2M2 353 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 ANKUB1A6NFN9 424 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 CD63P08962 238 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 FABP4P15090 132 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 DIO1P49895 249 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 CARD18P57730 90 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 DUSP5Q16690 384 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 LINC00303Q3SY05 128 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 SLC16A12Q6ZSM3 486 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 THNSL2Q86YJ6 484 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 KIAA1958Q8N8K9 716 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 GJC3Q8NFK1 279 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 OR4C5Q8NGB2 326 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 OR4C16Q8NGL9 310 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 WSB2Q9NYS7 404 aaPredicted RBP12.13□□□□□ -0.47
TCOF1-214ENST00000515035 KLK11Q9UBX7 282 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 HS3ST2Q9Y278 367 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 RP1L1Q8IWN7 2480 aaPredicted RBP12.13□□□□□ -0.47
TCOF1-214ENST00000515035 SSSCA1O60232 199 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 TMEM11P17152 192 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 HSD17B7P56937 341 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 EEF1A2Q05639 463 aaKnown RBP12.13□□□□□ -0.47
TCOF1-214ENST00000515035 PRAMEF20Q5VT98 475 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 C1orf140Q5VVS0 124 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 TCTN3Q6NUS6 607 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 DOK3Q7L591 496 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 COMMD1Q8N668 190 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 OR2A14Q96R47 310 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 ZDHHC11Q9H8X9 412 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 TRAPPC4Q9Y296 219 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 K7EQM0 130 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 RPL27P61353 136 aaKnown RBP12.13□□□□□ -0.47
TCOF1-214ENST00000515035 ZNF528Q3MIS6 628 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 IGSF11Q5DX21 431 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 SYT13Q7L8C5 426 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 H2BFWTQ7Z2G1 175 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 OR10J5Q8NHC4 309 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 OLIG1Q8TAK6 271 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 SIT1Q9Y3P8 196 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 ITGB4P16144 1822 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 ZNF320A2RRD8 509 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 RNASEK-C17orf49H0YIS7 233 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 YKT6O15498 198 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 HRO43593 1189 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 MT-ATP6P00846 226 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 SFTA3P0C7M3 94 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 DTYMKP23919 212 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 ARL16Q0P5N6 197 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 COTL1Q14019 142 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 SLC38A9Q8NBW4 561 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 SLC24A4Q8NFF2 622 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 OR8D4Q8NGM9 314 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 KCNG2Q9UJ96 466 aa12.13□□□□□ -0.47
TCOF1-214ENST00000515035 ZNF891A8MT65 544 aaPredicted RBP12.12□□□□□ -0.47
TCOF1-214ENST00000515035 SLC31A2O15432 143 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 F11P03951 625 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 RAB5AP20339 215 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 HNF1AP20823 631 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 HRH1P35367 487 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 GSK3AP49840 483 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 GPR85P60893 370 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 TMEM240Q5SV17 173 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 UBAC2Q8NBM4 344 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 OR5M1Q8NGP8 315 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 CHEK1O14757 476 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 ENSAO43768 121 aaKnown RBP12.12□□□□□ -0.47
TCOF1-214ENST00000515035 CTSLP07711 333 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 MLF2Q15773 248 aaPredicted RBP12.12□□□□□ -0.47
TCOF1-214ENST00000515035 PRSS36Q5K4E3 855 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 TMEM268Q5VZI3 342 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 AFMIDQ63HM1 303 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 ACTR3CQ9C0K3 210 aaPredicted RBP12.12□□□□□ -0.47
TCOF1-214ENST00000515035 P2RY12Q9H244 342 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 SLC25A19Q9HC21 320 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 TNFRSF12AQ9NP84 129 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 PISDQ9UG56 409 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 MICAL3Q7RTP6 2002 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 RAB27BO00194 218 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 AQP7O14520 342 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 LRP3O75074 770 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 BCL6P41182 706 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 GPNMBQ14956 572 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 SHHQ15465 462 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 ZNF626Q68DY1 528 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 ZNF813Q6ZN06 617 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 DUSP22Q9NRW4 184 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 SLCO1B1Q9Y6L6 691 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 DDX60Q8IY21 1712 aaKnown RBP12.12□□□□□ -0.47
TCOF1-214ENST00000515035 NSG1A0A0A6YYJ2 146 aa12.12□□□□□ -0.47
TCOF1-214ENST00000515035 TBPP20226 339 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms