RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 KLHL36Q8N4N3 616 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 ZNF485Q8NCK3 441 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 CPEB3Q8NE35 698 aaKnown RBP10.9□□□□□ -0.66
PDPN-210ENST00000513143 OR52N1Q8NH53 320 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 OR1F12Q8NHA8 337 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 COQ7Q99807 217 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 ATF6BQ99941 703 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 MND1Q9BWT6 205 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 MROQ9BYG7 248 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 TTTY10Q9BZA0 68 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 NPDC1Q9NQX5 325 aaPredicted RBP10.9□□□□□ -0.66
PDPN-210ENST00000513143 IKZF2Q9UKS7 526 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 FBXL3Q9UKT7 428 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 ERGIC3Q9Y282 383 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 LRP12Q9Y561 859 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 SNX5Q9Y5X3 404 aa10.9□□□□□ -0.66
PDPN-210ENST00000513143 USP9XQ93008 2570 aaPredicted RBP10.9□□□□□ -0.67
PDPN-210ENST00000513143 A0A087WXM4 84 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 IQCMA0A1B0GVH7 501 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 CLEC18AA5D8T8 446 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 MYL12BO14950 172 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 PTHP01270 115 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 KRT8P05787 483 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 THBDP07204 575 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 TACSTD2P09758 323 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 RNF224P0DH78 156 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 PCMT1P22061 227 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 CRYGSP22914 178 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 APEX1P27695 318 aaKnown RBP10.89□□□□□ -0.67
PDPN-210ENST00000513143 OTX1P32242 354 aaPredicted RBP10.89□□□□□ -0.67
PDPN-210ENST00000513143 DCTDP32321 178 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 HTR5AP47898 357 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 OR12D2P58182 307 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 GRB2P62993 217 aaKnown RBP10.89□□□□□ -0.67
PDPN-210ENST00000513143 EMX1Q04741 257 aaPredicted RBP10.89□□□□□ -0.67
PDPN-210ENST00000513143 RAB39AQ14964 217 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 TBCEQ15813 527 aaPredicted RBP10.89□□□□□ -0.67
PDPN-210ENST00000513143 KRTAP27-1Q3LI81 207 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 TP53I3Q53FA7 332 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 OR2G6Q5TZ20 316 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 SEZ6L2Q6UXD5 910 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 CLEC18BQ6UXF7 455 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 SPATC1Q76KD6 591 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 SVOPQ8N4V2 548 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 CLEC18CQ8NCF0 446 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 C4orf36Q96KX1 117 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 WFIKKN1Q96NZ8 548 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 KCNJ15Q99712 375 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 ISG20L2Q9H9L3 353 aaKnown RBP10.89□□□□□ -0.67
PDPN-210ENST00000513143 ELOVL3Q9HB03 270 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 ACOT13Q9NPJ3 140 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 NDRG3Q9UGV2 375 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 LSM2Q9Y333 95 aaKnown RBP10.89□□□□□ -0.67
PDPN-210ENST00000513143 DOPEY1Q5JWR5 2465 aa10.89□□□□□ -0.67
PDPN-210ENST00000513143 LOC100509620A0A075B734 347 aa10.88□□□□□ -0.67
PDPN-210ENST00000513143 J3QLW9 94 aa10.88□□□□□ -0.67
PDPN-210ENST00000513143 MT-ND5P03915 603 aa10.88□□□□□ -0.67
PDPN-210ENST00000513143 SMIM18P0DKX4 95 aa10.88□□□□□ -0.67
PDPN-210ENST00000513143 ZNF19P17023 458 aa10.88□□□□□ -0.67
PDPN-210ENST00000513143 STOMP27105 288 aa10.88□□□□□ -0.67
PDPN-210ENST00000513143 MAP2K4P45985 399 aa10.88□□□□□ -0.67
PDPN-210ENST00000513143 IDH3GP51553 393 aaPredicted RBP10.88□□□□□ -0.67
PDPN-210ENST00000513143 RIDAP52758 137 aaKnown RBP10.88□□□□□ -0.67
PDPN-210ENST00000513143 WNT4P56705 351 aa10.88□□□□□ -0.67
PDPN-210ENST00000513143 TAF13Q15543 124 aa10.88□□□□□ -0.67
PDPN-210ENST00000513143 LIPNQ5VXI9 398 aa10.88□□□□□ -0.67
PDPN-210ENST00000513143 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.88□□□□□ -0.67
PDPN-210ENST00000513143 YIPF7Q8N8F6 280 aa10.88□□□□□ -0.67
PDPN-210ENST00000513143 SSC4DQ8WTU2 575 aa10.88□□□□□ -0.67
PDPN-210ENST00000513143 SPRYD4Q8WW59 207 aaPredicted RBP10.88□□□□□ -0.67
PDPN-210ENST00000513143 GATAD2BQ8WXI9 593 aa10.88□□□□□ -0.67
PDPN-210ENST00000513143 PELI1Q96FA3 418 aa10.88□□□□□ -0.67
PDPN-210ENST00000513143 POM121L2Q96KW2 1035 aa10.88□□□□□ -0.67
PDPN-210ENST00000513143 MED18Q9BUE0 208 aa10.88□□□□□ -0.67
PDPN-210ENST00000513143 C1QTNF6Q9BXI9 259 aa10.88□□□□□ -0.67
PDPN-210ENST00000513143 NIPAL2Q9H841 368 aa10.88□□□□□ -0.67
PDPN-210ENST00000513143 NPAP1Q9NZP6 1156 aa10.88□□□□□ -0.67
PDPN-210ENST00000513143 GNG8Q9UK08 70 aa10.88□□□□□ -0.67
PDPN-210ENST00000513143 IGHV1-18A0A0C4DH31 117 aa10.87□□□□□ -0.67
PDPN-210ENST00000513143 TUBAL3A6NHL2 446 aa10.87□□□□□ -0.67
PDPN-210ENST00000513143 SRSF10O75494 262 aaKnown RBP10.87□□□□□ -0.67
PDPN-210ENST00000513143 CELA3BP08861 270 aa10.87□□□□□ -0.67
PDPN-210ENST00000513143 DBHP09172 617 aa10.87□□□□□ -0.67
PDPN-210ENST00000513143 HSD11B1P28845 292 aa10.87□□□□□ -0.67
PDPN-210ENST00000513143 APLNRP35414 380 aa10.87□□□□□ -0.67
PDPN-210ENST00000513143 PEX19P40855 299 aa10.87□□□□□ -0.67
PDPN-210ENST00000513143 GDI2P50395 445 aaKnown RBP10.87□□□□□ -0.67
PDPN-210ENST00000513143 ZNF83P51522 516 aa10.87□□□□□ -0.67
PDPN-210ENST00000513143 GALK2Q01415 458 aa10.87□□□□□ -0.67
PDPN-210ENST00000513143 MRPL28Q13084 256 aaKnown RBP10.87□□□□□ -0.67
PDPN-210ENST00000513143 SNTB1Q13884 538 aaKnown RBP10.87□□□□□ -0.67
PDPN-210ENST00000513143 SPHARQ15513 63 aa10.87□□□□□ -0.67
PDPN-210ENST00000513143 FAM220AQ7Z4H9 259 aa10.87□□□□□ -0.67
PDPN-210ENST00000513143 MYPOPQ86VE0 399 aaPredicted RBP10.87□□□□□ -0.67
PDPN-210ENST00000513143 SLC30A7Q8NEW0 376 aa10.87□□□□□ -0.67
PDPN-210ENST00000513143 HAVCR2Q8TDQ0 301 aa10.87□□□□□ -0.67
PDPN-210ENST00000513143 SLC7A6Q92536 515 aa10.87□□□□□ -0.67
PDPN-210ENST00000513143 SPTSSAQ969W0 71 aa10.87□□□□□ -0.67
PDPN-210ENST00000513143 OR5M11Q96RB7 305 aa10.87□□□□□ -0.67
PDPN-210ENST00000513143 ACOXLQ9NUZ1 547 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms