RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 OR6C68A6NDL8 312 aa12.56□□□□□ -0.4
UBE2D3-228ENST00000508974 H3BSA7 217 aa12.56□□□□□ -0.4
UBE2D3-228ENST00000508974 ARPC3O15145 178 aa12.56□□□□□ -0.4
UBE2D3-228ENST00000508974 MSMBP08118 114 aa12.56□□□□□ -0.4
UBE2D3-228ENST00000508974 TNFAIP6P98066 277 aaPredicted RBP12.56□□□□□ -0.4
UBE2D3-228ENST00000508974 MS4A2Q01362 244 aa12.56□□□□□ -0.4
UBE2D3-228ENST00000508974 KCNMB1Q16558 191 aa12.56□□□□□ -0.4
UBE2D3-228ENST00000508974 ZMAT1Q5H9K5 638 aa12.56□□□□□ -0.4
UBE2D3-228ENST00000508974 C1orf174Q8IYL3 243 aa12.56□□□□□ -0.4
UBE2D3-228ENST00000508974 CYB561A3Q8NBI2 242 aa12.56□□□□□ -0.4
UBE2D3-228ENST00000508974 GJC3Q8NFK1 279 aa12.56□□□□□ -0.4
UBE2D3-228ENST00000508974 OR52L1Q8NGH7 329 aa12.56□□□□□ -0.4
UBE2D3-228ENST00000508974 TMEM186Q96B77 213 aa12.56□□□□□ -0.4
UBE2D3-228ENST00000508974 TIMD4Q96H15 378 aa12.56□□□□□ -0.4
UBE2D3-228ENST00000508974 PLA2G12AQ9BZM1 189 aa12.56□□□□□ -0.4
UBE2D3-228ENST00000508974 WDR76Q9H967 626 aa12.56□□□□□ -0.4
UBE2D3-228ENST00000508974 TBC1D23Q9NUY8 699 aa12.56□□□□□ -0.4
UBE2D3-228ENST00000508974 DCAF16Q9NXF7 216 aa12.56□□□□□ -0.4
UBE2D3-228ENST00000508974 ZDHHC8Q9ULC8 765 aa12.56□□□□□ -0.4
UBE2D3-228ENST00000508974 CDH10Q9Y6N8 788 aa12.56□□□□□ -0.4
UBE2D3-228ENST00000508974 KRT36O76013 467 aa12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 UBOX5O94941 541 aa12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 CCNB2O95067 398 aa12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 SOX14O95416 240 aa12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 GASTP01350 101 aa12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 T-ENOLP0DO92 83 aa12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 CALB2P22676 271 aa12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 PYCR1P32322 319 aa12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 LIPAP38571 399 aa12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 RPS27P42677 84 aaKnown RBP12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 LCN8Q6JVE9 175 aa12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 PGM2L1Q6PCE3 622 aa12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 CFAP77Q6ZQR2 320 aa12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 Q6ZR03 302 aa12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 AQP11Q8NBQ7 271 aa12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 SLC26A10Q8NG04 563 aa12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 OR4C15Q8NGM1 316 aa12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 OR8D4Q8NGM9 314 aa12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 OR51F2Q8NH61 342 aa12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 RAB1CQ92928 201 aa12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 DCLRE1CQ96SD1 692 aaKnown RBP12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 PITX2Q99697 317 aa12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 GAL3ST1Q99999 423 aa12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 CDADC1Q9BWV3 514 aa12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 HDHD2Q9H0R4 259 aa12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 UBAP1Q9NZ09 502 aa12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 CGGBP1Q9UFW8 167 aaPredicted RBP12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 KLHL21Q9UJP4 597 aa12.55□□□□□ -0.4
UBE2D3-228ENST00000508974 TVP23AA6NH52 213 aa12.54□□□□□ -0.4
UBE2D3-228ENST00000508974 DYNC1I1O14576 645 aa12.54□□□□□ -0.4
UBE2D3-228ENST00000508974 MAGEA2P43356 314 aa12.54□□□□□ -0.4
UBE2D3-228ENST00000508974 HIST1H3AP68431 136 aa12.54□□□□□ -0.4
UBE2D3-228ENST00000508974 COX10Q12887 443 aa12.54□□□□□ -0.4
UBE2D3-228ENST00000508974 TRIM25Q14258 630 aaKnown RBP12.54□□□□□ -0.4
UBE2D3-228ENST00000508974 FAM98BQ52LJ0 330 aaKnown RBP12.54□□□□□ -0.4
UBE2D3-228ENST00000508974 HIST2H3PS2Q5TEC6 136 aa12.54□□□□□ -0.4
UBE2D3-228ENST00000508974 OR2T2Q6IF00 324 aa12.54□□□□□ -0.4
UBE2D3-228ENST00000508974 SLC18B1Q6NT16 456 aa12.54□□□□□ -0.4
UBE2D3-228ENST00000508974 FAHD2BQ6P2I3 314 aaPredicted RBP12.54□□□□□ -0.4
UBE2D3-228ENST00000508974 LYPD4Q6UWN0 246 aa12.54□□□□□ -0.4
UBE2D3-228ENST00000508974 HIST2H3AQ71DI3 136 aa12.54□□□□□ -0.4
UBE2D3-228ENST00000508974 BHLHE23Q8NDY6 225 aa12.54□□□□□ -0.4
UBE2D3-228ENST00000508974 PROKR2Q8NFJ6 384 aa12.54□□□□□ -0.4
UBE2D3-228ENST00000508974 OR10AD1Q8NGE0 317 aa12.54□□□□□ -0.4
UBE2D3-228ENST00000508974 OR51L1Q8NGJ5 315 aa12.54□□□□□ -0.4
UBE2D3-228ENST00000508974 OR9Q1Q8NGQ5 310 aa12.54□□□□□ -0.4
UBE2D3-228ENST00000508974 OR2AJ1Q8NGZ0 328 aa12.54□□□□□ -0.4
UBE2D3-228ENST00000508974 TMEM158Q8WZ71 300 aa12.54□□□□□ -0.4
UBE2D3-228ENST00000508974 FAHD2AQ96GK7 314 aa12.54□□□□□ -0.4
UBE2D3-228ENST00000508974 LRGUKQ96M69 825 aa12.54□□□□□ -0.4
UBE2D3-228ENST00000508974 DIRC2Q96SL1 478 aa12.54□□□□□ -0.4
UBE2D3-228ENST00000508974 COQ7Q99807 217 aa12.54□□□□□ -0.4
UBE2D3-228ENST00000508974 REEP1Q9H902 201 aa12.54□□□□□ -0.4
UBE2D3-228ENST00000508974 SAMHD1Q9Y3Z3 626 aaKnown RBP12.54□□□□□ -0.4
UBE2D3-228ENST00000508974 IGHV3-64DA0A0J9YX35 117 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 F5H5K5 113 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 BHLHE40O14503 412 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 IDH3BO43837 385 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 CD55P08174 381 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 ADH4P08319 380 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 KITLGP21583 273 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 TNFSF4P23510 183 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 RGS6P49758 472 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 HMGA2P52926 109 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 CDK5R2Q13319 367 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 KRTAP24-1Q3LI83 254 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 SLC36A3Q495N2 470 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 ZNF770Q6IQ21 691 aaPredicted RBP12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 ACSM5Q6NUN0 579 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 ZBTB46Q86UZ6 589 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 ARHGAP24Q8N264 748 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 ATG16L2Q8NAA4 619 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 SPATA3Q8NHX4 192 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 ITLN1Q8WWA0 313 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 ZNRF4Q8WWF5 429 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 PTP4A1Q93096 173 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 APOBEC3DQ96AK3 386 aaPredicted RBP12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 HAVCR1Q96D42 359 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 RAB39BQ96DA2 213 aa12.53□□□□□ -0.4
UBE2D3-228ENST00000508974 COG8Q96MW5 612 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms