RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 DANCRP0C864 163 aa10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 CCNOP22674 350 aa10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 APOBEC3AP31941 199 aaPredicted RBP10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 GLRXP35754 106 aa10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 CAPGP40121 348 aa10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 RAD52P43351 418 aa10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 UCP2P55851 309 aa10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 SNTB2Q13425 540 aaKnown RBP10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 IL18R1Q13478 541 aa10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 RSPO1Q2MKA7 263 aaPredicted RBP10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 KRTAP27-1Q3LI81 207 aa10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 ZNF691Q5VV52 312 aa10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 TMEM154Q6P9G4 183 aa10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 ARL9Q6T311 187 aa10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 PAMR1Q6UXH9 720 aa10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 UNQ6126/PRO20091Q6UXV3 157 aa10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 C1orf174Q8IYL3 243 aa10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 ENTHD1Q8IYW4 607 aa10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 OTOSQ8NHW6 89 aa10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 SMAP2Q8WU79 429 aaPredicted RBP10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 TMEM171Q8WVE6 324 aa10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 CYGBQ8WWM9 190 aa10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 C4orf45Q96LM5 186 aa10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 DCLRE1CQ96SD1 692 aaKnown RBP10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 ATF6BQ99941 703 aa10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 ABHD6Q9BV23 337 aa10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 ADI1Q9BV57 179 aa10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 LIME1Q9H400 295 aa10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 ELOVL3Q9HB03 270 aa10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 DNAJC27Q9NZQ0 273 aa10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 EIF3KQ9UBQ5 218 aaKnown RBP10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.27□□□□□ -0.77
PDLIM5-208ENST00000504489 ENTPD6O75354 484 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 RAF1P04049 648 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 ALOX5APP20292 161 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 OTX1P32242 354 aaPredicted RBP10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 TTKP33981 857 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 THBS4P35443 961 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 WNT5AP41221 380 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 NAA10P41227 235 aaPredicted RBP10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 FABP6P51161 128 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 NUDT6P53370 316 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 RPS23P62266 143 aaKnown RBP10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 POU4F2Q12837 409 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 EIF2B1Q14232 305 aaKnown RBP10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 KRT80Q6KB66 452 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 DTX2Q86UW9 622 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 FBXL14Q8N1E6 418 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 SETD9Q8NE22 299 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 RNF133Q8WVZ7 376 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 IGFBPL1Q8WX77 278 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 SLC7A6Q92536 515 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 NRGNQ92686 78 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 SLAMF6Q96DU3 332 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 Q96MT0 163 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 CNN2Q99439 309 aaKnown RBP10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 MNTQ99583 582 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 BCL2L14Q9BZR8 327 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 ADGRL4Q9HBW9 690 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 FAIMQ9NVQ4 179 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 TBCCD1Q9NVR7 557 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 CLN6Q9NWW5 311 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 ST6GALNAC2Q9UJ37 374 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 HSPE1-MOB4S4R3N1 261 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 PRRC2AP48634 2157 aaKnown RBP10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 NOTCH2Q04721 2471 aa10.26□□□□□ -0.77
PDLIM5-208ENST00000504489 SNTNA6NMZ2 147 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 ZNF878C9JN71 531 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 SMPD2O60906 423 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 LYNP07948 512 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 DBHP09172 617 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 SBK2P0C263 348 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 FAM157BP0CG42 384 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 CD53P19397 219 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 TUBG1P23258 451 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 SERPINF1P36955 418 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 SLC15A1P46059 708 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 MTNR1AP48039 350 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 RGS6P49758 472 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 ISL1P61371 349 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 ADIPOQQ15848 244 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 AGAP6Q5VW22 663 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 VHLLQ6RSH7 139 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 ZNF101Q8IZC7 436 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 MUC15Q8N387 334 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 THEM6Q8WUY1 208 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 TFAP2CQ92754 450 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 NINJ1Q92982 152 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 SPTSSAQ969W0 71 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 AMELYQ99218 206 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 KCNJ15Q99712 375 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 TUBG2Q9NRH3 451 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 CENPMQ9NSP4 180 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 CBLN4Q9NTU7 201 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 AASSQ9UDR5 926 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 LAMP5Q9UJQ1 280 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 KLHDC2Q9Y2U9 406 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 GRIP1Q9Y3R0 1128 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 CMAHPQ9Y471 501 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 TMEM14AQ9Y6G1 99 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms