RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 PPP1CAP62136 330 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 TRA2BP62995 288 aaKnown RBP6.86□□□□□ -1.31
NEDD9-208ENST00000504387 ZP2Q05996 745 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 EML5Q05BV3 1969 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 GPR18Q14330 331 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 USF2Q15853 346 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-208ENST00000504387 FBXO42Q6P3S6 717 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 ANKRD33Q7Z3H0 272 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 LYG2Q86SG7 212 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 ZNF101Q8IZC7 436 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 OR10H5Q8NGA6 315 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 OR4D6Q8NGJ1 314 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 GPX8Q8TED1 209 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 WFIKKN2Q8TEU8 576 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 SCARF2Q96GP6 870 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-208ENST00000504387 DCBLD2Q96PD2 775 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 TGM7Q96PF1 710 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 ZNF587Q96SQ5 575 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-208ENST00000504387 NOTCH4Q99466 2003 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 IER2Q9BTL4 223 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 TMEM106CQ9BVX2 250 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 SLC17A9Q9BYT1 436 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 DAPP1Q9UN19 280 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 LSM5Q9Y4Y9 91 aaKnown RBP6.86□□□□□ -1.31
NEDD9-208ENST00000504387 CABIN1Q9Y6J0 2220 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 A0A1W2PP11 408 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 URADA6NGE7 173 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 C5orf52A6NGY3 159 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 LILRB3O75022 631 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 OR8U8P0C7N1 319 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 SLC2A1P11166 492 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 TFF2Q03403 129 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 TLE1Q04724 770 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 ZIC1Q15915 447 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 MICBQ29980 383 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 MST1LQ2TV78 715 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 GFI1BQ5VTD9 330 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 PTCRAQ6ISU1 281 aaPredicted RBP6.85□□□□□ -1.31
NEDD9-208ENST00000504387 DRAM2Q6UX65 266 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 LRP11Q86VZ4 500 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 LILRB2Q8N423 598 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 RCBTB1Q8NDN9 531 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 OR13C3Q8NGS6 347 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 OR9A4Q8NGU2 314 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 SPPL3Q8TCT6 385 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 SP7Q8TDD2 431 aaPredicted RBP6.85□□□□□ -1.31
NEDD9-208ENST00000504387 ZNF524Q96C55 264 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 KTI12Q96EK9 354 aaPredicted RBP6.85□□□□□ -1.31
NEDD9-208ENST00000504387 POM121Q96HA1 1249 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 KIRREL1Q96J84 757 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 RPP25Q9BUL9 199 aaKnown RBP6.85□□□□□ -1.31
NEDD9-208ENST00000504387 NRSN2Q9GZP1 204 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 EPHX3Q9H6B9 360 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 DNAJB12Q9NXW2 375 aaKnown RBP6.85□□□□□ -1.31
NEDD9-208ENST00000504387 TBX21Q9UL17 535 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 ICAM5Q9UMF0 924 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 DOCK8Q8NF50 2099 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 A0A0A6YYH2 397 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 A6NJ64 397 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 P2RY10O00398 339 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 BRINP1O60477 761 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 CRHP06850 196 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 S100PP25815 95 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 GJA4P35212 333 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 RAB2AP61019 212 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 RIPPLY1Q0D2K3 151 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 ECH1Q13011 328 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 ARHGAP19Q14CB8 494 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 ASPHD2Q6ICH7 369 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 ULK3Q6PHR2 472 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 ZNF565Q8N9K5 539 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 CDRT4Q8N9R6 151 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 SLC2A12Q8TD20 617 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 SLAMF9Q96A28 289 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 TMEM41AQ96HV5 264 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 OR10C1Q96KK4 312 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 NICN1Q9BSH3 213 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 RNF126Q9BV68 326 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 GGACTQ9BVM4 153 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 OR51M1Q9H341 326 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 TAF9BQ9HBM6 251 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 ZNF275Q9NSD4 429 aaPredicted RBP6.85□□□□□ -1.31
NEDD9-208ENST00000504387 ETV7Q9Y603 341 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 COLEC10Q9Y6Z7 277 aa6.85□□□□□ -1.31
NEDD9-208ENST00000504387 CD74P04233 296 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 THBS1P07996 1170 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 H2AFB1P0C5Y9 115 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 ACKR3P25106 362 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 DRD3P35462 400 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 GPX4P36969 197 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-208ENST00000504387 HSD17B2P37059 387 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 ADPRHP54922 357 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 BTG2P78543 158 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 RPL18Q07020 188 aaKnown RBP6.84□□□□□ -1.31
NEDD9-208ENST00000504387 KIAA0141Q14154 515 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-208ENST00000504387 MPPED2Q15777 294 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 RSPO4Q2I0M5 234 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-208ENST00000504387 ZNF343Q6P1L6 599 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 SSX9Q7RTT3 188 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 ZNF679Q8IYX0 411 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms