RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 ACMSDQ8TDX5 336 aa2□□□□□ -2.09
RIF1-212ENST00000498041 LMX1AQ8TE12 382 aa2□□□□□ -2.09
RIF1-212ENST00000498041 SLC37A2Q8TED4 501 aa2□□□□□ -2.09
RIF1-212ENST00000498041 C16orf78Q8WTQ4 265 aa2□□□□□ -2.09
RIF1-212ENST00000498041 SLC13A3Q8WWT9 602 aa2□□□□□ -2.09
RIF1-212ENST00000498041 SELENOMQ8WWX9 145 aa2□□□□□ -2.09
RIF1-212ENST00000498041 TFGQ92734 400 aaPredicted RBP2□□□□□ -2.09
RIF1-212ENST00000498041 EXOSC8Q96B26 276 aaKnown RBP2□□□□□ -2.09
RIF1-212ENST00000498041 TMIGD2Q96BF3 282 aa2□□□□□ -2.09
RIF1-212ENST00000498041 C19orf60Q96EN9 201 aa2□□□□□ -2.09
RIF1-212ENST00000498041 C11orf24Q96F05 449 aaPredicted RBP2□□□□□ -2.09
RIF1-212ENST00000498041 CNDP1Q96KN2 507 aa2□□□□□ -2.09
RIF1-212ENST00000498041 ZNF641Q96N77 438 aaPredicted RBP2□□□□□ -2.09
RIF1-212ENST00000498041 RPF2Q9H7B2 306 aaKnown RBP2□□□□□ -2.09
RIF1-212ENST00000498041 COQ10BQ9H8M1 238 aa2□□□□□ -2.09
RIF1-212ENST00000498041 NANOGQ9H9S0 305 aa2□□□□□ -2.09
RIF1-212ENST00000498041 NTN4Q9HB63 628 aa2□□□□□ -2.09
RIF1-212ENST00000498041 PARVBQ9HBI1 364 aa2□□□□□ -2.09
RIF1-212ENST00000498041 SGK2Q9HBY8 427 aa2□□□□□ -2.09
RIF1-212ENST00000498041 APMAPQ9HDC9 416 aa2□□□□□ -2.09
RIF1-212ENST00000498041 MIEF1Q9NQG6 463 aa2□□□□□ -2.09
RIF1-212ENST00000498041 EXOSC3Q9NQT5 275 aaKnown RBP2□□□□□ -2.09
RIF1-212ENST00000498041 AIG1Q9NVV5 245 aa2□□□□□ -2.09
RIF1-212ENST00000498041 TAS2R13Q9NYV9 303 aa2□□□□□ -2.09
RIF1-212ENST00000498041 ADA2Q9NZK5 511 aa2□□□□□ -2.09
RIF1-212ENST00000498041 KLRF1Q9NZS2 232 aa2□□□□□ -2.09
RIF1-212ENST00000498041 MBD2Q9UBB5 411 aa2□□□□□ -2.09
RIF1-212ENST00000498041 CD300AQ9UGN4 299 aa2□□□□□ -2.09
RIF1-212ENST00000498041 APPL1Q9UKG1 709 aa2□□□□□ -2.09
RIF1-212ENST00000498041 MMP17Q9ULZ9 603 aa2□□□□□ -2.09
RIF1-212ENST00000498041 ABCG2Q9UNQ0 655 aa2□□□□□ -2.09
RIF1-212ENST00000498041 POMPQ9Y244 141 aa2□□□□□ -2.09
RIF1-212ENST00000498041 ASF1AQ9Y294 204 aa2□□□□□ -2.09
RIF1-212ENST00000498041 FKBP7Q9Y680 259 aa2□□□□□ -2.09
RIF1-212ENST00000498041 F5P12259 2224 aa2□□□□□ -2.09
RIF1-212ENST00000498041 EYSQ5T1H1 3165 aa2□□□□□ -2.09
RIF1-212ENST00000498041 MYO18BQ8IUG5 2567 aa2□□□□□ -2.09
RIF1-212ENST00000498041 MED12Q93074 2177 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 IGHV5-51A0A0C4DH38 117 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 ZFP92A6NM28 416 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 PDZK1P1A8MUH7 402 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 H0YGG7 62 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 hCG_2039718K7EN88 272 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 K7EPI3 171 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 PSMD12O00232 456 aaPredicted RBP1.99□□□□□ -2.09
RIF1-212ENST00000498041 UPK1AO00322 258 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 PLPP1O14494 284 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 SLC9A3R1O14745 358 aaPredicted RBP1.99□□□□□ -2.09
RIF1-212ENST00000498041 MRASO14807 208 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 UBDO15205 165 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 ACOX3O15254 700 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 GYG2O15488 501 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 VEGFDO43915 354 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 TPST2O60704 377 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 SMIM24O75264 130 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 SPAG6O75602 509 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 SERF1AO75920 110 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 CLDN9O95484 217 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 ANP32DO95626 131 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 F10P00742 488 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 IGKV1D-16P01601 117 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 OPN1LWP04000 364 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 FGF4P08620 206 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 IL3P08700 152 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 OR56A5P0C7T3 313 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 UBTFL6P0CB48 400 aaPredicted RBP1.99□□□□□ -2.09
RIF1-212ENST00000498041 CCL4P13236 92 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 PRG2P13727 222 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 FOLR1P15328 257 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 MGMTP16455 207 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 UGT2B7P16662 529 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 MAGP20916 626 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 ZP3P21754 424 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 IGHV1-2P23083 117 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 HMOX2P30519 316 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 ACVR1BP36896 505 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 CD79BP40259 229 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 ACTR1BP42025 376 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 NSG1P42857 185 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 OR1E2P47887 323 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 GABRA4P48169 554 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 POU3F4P49335 361 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 TTPAP49638 278 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 POLR2JP52435 117 aaKnown RBP1.99□□□□□ -2.09
RIF1-212ENST00000498041 CRISP3P54108 245 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 AQP4P55087 323 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 STARD6P59095 220 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 ACTR1AP61163 376 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 STXBP1P61764 594 aaKnown RBP1.99□□□□□ -2.09
RIF1-212ENST00000498041 BTN3A2P78410 334 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 MRPS22P82650 360 aaKnown RBP1.99□□□□□ -2.09
RIF1-212ENST00000498041 IRF8Q02556 426 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 LIPEQ05469 1076 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 PUDPQ08623 228 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 FUT5Q11128 374 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 SLAMF1Q13291 335 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 IL18R1Q13478 541 aa1.99□□□□□ -2.09
RIF1-212ENST00000498041 ELAVL3Q14576 367 aaKnown RBP1.99□□□□□ -2.09
RIF1-212ENST00000498041 LASP1Q14847 261 aaKnown RBP1.99□□□□□ -2.09
RIF1-212ENST00000498041 RCN1Q15293 331 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms