RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 CACNA1DQ01668 2161 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 PSMD9O00233 223 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 AIREO43918 545 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 GPRIN2O60269 458 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 SRSF10O75494 262 aaKnown RBP12.42□□□□□ -0.42
VPS26A-209ENST00000497564 FARS2O95363 451 aaKnown RBP12.42□□□□□ -0.42
VPS26A-209ENST00000497564 WNT11O96014 354 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 CGAP01215 116 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 IL2RAP01589 272 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 TMIGD3P0DMS9 266 aaPredicted RBP12.42□□□□□ -0.42
VPS26A-209ENST00000497564 GLI4P10075 376 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 B4GALT1P15291 398 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 CTSSP25774 331 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 GRNP28799 593 aaKnown RBP12.42□□□□□ -0.42
VPS26A-209ENST00000497564 CRYBB2P43320 205 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 PCBD1P61457 104 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 SCRN3Q0VDG4 424 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 FAPQ12884 760 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 ZNF813Q6ZN06 617 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 Q6ZT83 130 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 MRGPRGQ86SM5 289 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 UBE2J2Q8N2K1 259 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 ZFP41Q8N8Y5 198 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 CNEP1R1Q8N9A8 125 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 HTRA1Q92743 480 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 FBXO17Q96EF6 278 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 BOD1Q96IK1 185 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 PGLYRP3Q96LB9 341 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 DMRTA2Q96SC8 542 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 OR51E2Q9H255 320 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 GRIP1Q9Y3R0 1128 aa12.42□□□□□ -0.42
VPS26A-209ENST00000497564 PKDREJQ9NTG1 2253 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 TRDV1A0A1B0GX56 115 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 SLC22A1O15245 554 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 GPX5O75715 221 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 IL18BPO95998 194 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 HLA-DPB1P04440 258 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 ITGA5P08648 1049 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 MMP7P09237 267 aaPredicted RBP12.41□□□□□ -0.42
VPS26A-209ENST00000497564 H2BFMP0C1H6 154 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 CD8BP10966 210 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 COX5AP20674 150 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 FGF9P31371 208 aaPredicted RBP12.41□□□□□ -0.42
VPS26A-209ENST00000497564 PSMB10P40306 273 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 GDI2P50395 445 aaKnown RBP12.41□□□□□ -0.42
VPS26A-209ENST00000497564 CCR9P51686 369 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 CASP6P55212 293 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 FOXG1P55316 489 aaPredicted RBP12.41□□□□□ -0.42
VPS26A-209ENST00000497564 NANOS3P60323 173 aaKnown RBP12.41□□□□□ -0.42
VPS26A-209ENST00000497564 RPS25P62851 125 aaKnown RBP12.41□□□□□ -0.42
VPS26A-209ENST00000497564 GRB2P62993 217 aaKnown RBP12.41□□□□□ -0.42
VPS26A-209ENST00000497564 FOXF2Q12947 444 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 ALKBH1Q13686 389 aaKnown RBP12.41□□□□□ -0.42
VPS26A-209ENST00000497564 CNPY1Q3B7I2 92 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 CCDC92Q53HC0 331 aaPredicted RBP12.41□□□□□ -0.42
VPS26A-209ENST00000497564 ZNF544Q6NX49 715 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 VWA1Q6PCB0 445 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 ARL9Q6T311 187 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 KLHL24Q6TFL4 600 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 DPPA2Q7Z7J5 298 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 ALDH16A1Q8IZ83 802 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 LRRC18Q8N456 261 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 MS4A15Q8N5U1 240 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 OR1K1Q8NGR3 316 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 OR2G2Q8NGZ5 317 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 RPL3LQ92901 407 aaKnown RBP12.41□□□□□ -0.42
VPS26A-209ENST00000497564 STARD4Q96DR4 205 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 SFXN3Q9BWM7 321 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 KCNN2Q9H2S1 579 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 R4GMQ9 66 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 APCP25054 2843 aa12.41□□□□□ -0.42
VPS26A-209ENST00000497564 TRBV2A0A0J9YWF9 115 aa12.4□□□□□ -0.42
VPS26A-209ENST00000497564 PNMA8CA0A1B0GUJ8 204 aa12.4□□□□□ -0.42
VPS26A-209ENST00000497564 RER1O15258 196 aa12.4□□□□□ -0.42
VPS26A-209ENST00000497564 RPP14O95059 124 aaKnown RBP12.4□□□□□ -0.42
VPS26A-209ENST00000497564 ZNF32P17041 273 aa12.4□□□□□ -0.42
VPS26A-209ENST00000497564 OTX1P32242 354 aaPredicted RBP12.4□□□□□ -0.42
VPS26A-209ENST00000497564 MMP16P51512 607 aa12.4□□□□□ -0.42
VPS26A-209ENST00000497564 ECH1Q13011 328 aa12.4□□□□□ -0.42
VPS26A-209ENST00000497564 RAB35Q15286 201 aa12.4□□□□□ -0.42
VPS26A-209ENST00000497564 ZNF829Q3KNS6 432 aaPredicted RBP12.4□□□□□ -0.42
VPS26A-209ENST00000497564 ELFN2Q5R3F8 820 aa12.4□□□□□ -0.42
VPS26A-209ENST00000497564 OR7E24Q6IFN5 339 aa12.4□□□□□ -0.42
VPS26A-209ENST00000497564 ANKRD16Q6P6B7 361 aa12.4□□□□□ -0.42
VPS26A-209ENST00000497564 SLC16A14Q7RTX9 510 aa12.4□□□□□ -0.42
VPS26A-209ENST00000497564 BTLAQ7Z6A9 289 aa12.4□□□□□ -0.42
VPS26A-209ENST00000497564 CATSPERDQ86XM0 798 aa12.4□□□□□ -0.42
VPS26A-209ENST00000497564 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.4□□□□□ -0.42
VPS26A-209ENST00000497564 SKA3Q8IX90 412 aa12.4□□□□□ -0.42
VPS26A-209ENST00000497564 NAXEQ8NCW5 288 aa12.4□□□□□ -0.42
VPS26A-209ENST00000497564 C1orf162Q8NEQ5 155 aaPredicted RBP12.4□□□□□ -0.42
VPS26A-209ENST00000497564 BCL2L2Q92843 193 aaPredicted RBP12.4□□□□□ -0.42
VPS26A-209ENST00000497564 C4orf45Q96LM5 186 aa12.4□□□□□ -0.42
VPS26A-209ENST00000497564 SH3GL3Q99963 347 aa12.4□□□□□ -0.42
VPS26A-209ENST00000497564 HDHD2Q9H0R4 259 aa12.4□□□□□ -0.42
VPS26A-209ENST00000497564 CENPMQ9NSP4 180 aa12.4□□□□□ -0.42
VPS26A-209ENST00000497564 ZNF224Q9NZL3 707 aa12.4□□□□□ -0.42
VPS26A-209ENST00000497564 FRRS1LQ9P0K9 344 aa12.4□□□□□ -0.42
VPS26A-209ENST00000497564 ATPIF1Q9UII2 106 aa12.4□□□□□ -0.42
VPS26A-209ENST00000497564 SSR3Q9UNL2 185 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms