RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 CLEC12AQ5QGZ9 265 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 PGBD2Q6P3X8 592 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 ARL9Q6T311 187 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 UNQ6126/PRO20091Q6UXV3 157 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 ZNF771Q7L3S4 317 aaPredicted RBP9.06□□□□□ -0.96
COL6A3-214ENST00000493608 ADCK1Q86TW2 530 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 JAZF1Q86VZ6 243 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 OR6V1Q8N148 313 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 CCDC197Q8NCU1 140 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 SDR9C7Q8NEX9 313 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 CLPTM1LQ96KA5 538 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 RASSF4Q9H2L5 321 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 SAP30LQ9HAJ7 183 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 RPRD1BQ9NQG5 326 aaKnown RBP9.06□□□□□ -0.96
COL6A3-214ENST00000493608 NKIRAS2Q9NYR9 191 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 ACTR3BQ9P1U1 418 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 LPAR3Q9UBY5 353 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 NDRG4Q9ULP0 352 aaKnown RBP9.06□□□□□ -0.96
COL6A3-214ENST00000493608 POLR1DQ9Y2S0 133 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 IGLV1-36A0A0B4J1U3 117 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 PLSCR5A0PG75 271 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 OR6C68A6NDL8 312 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 RNF212BA8MTL3 300 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 TIMM8AO60220 97 aaPredicted RBP9.05□□□□□ -0.96
COL6A3-214ENST00000493608 FAM107AO95990 144 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 RENP00797 406 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 GASTP01350 101 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 GAAP10253 952 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 COX5BP10606 129 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 IFNGR2P38484 337 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 ERFP50548 548 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 LMO4P61968 165 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 MRPS11P82912 194 aaKnown RBP9.05□□□□□ -0.96
COL6A3-214ENST00000493608 TSPAN31Q12999 210 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 SPATS1Q496A3 300 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 ZNF620Q6ZNG0 422 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 CXXC5Q7LFL8 322 aaKnown RBP9.05□□□□□ -0.96
COL6A3-214ENST00000493608 DHFR2Q86XF0 187 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 LINC00346Q8IVM7 164 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 OR5AS1Q8N127 324 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 CYB561A3Q8NBI2 242 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 OR52E2Q8NGJ4 325 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 OR1F12Q8NHA8 337 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 CCL17Q92583 94 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 CMBLQ96DG6 245 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 BTBD10Q9BSF8 475 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 WACQ9BTA9 647 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 RACGAP1Q9H0H5 632 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 TBCCD1Q9NVR7 557 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 VNN3Q9NY84 501 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 TMEFF2Q9UIK5 374 aaPredicted RBP9.05□□□□□ -0.96
COL6A3-214ENST00000493608 KLHL21Q9UJP4 597 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 LYVE1Q9Y5Y7 322 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 LHFPL6Q9Y693 200 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 U3KQV3 271 aa9.05□□□□□ -0.96
COL6A3-214ENST00000493608 MXRA5Q9NR99 2828 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 TANC2Q9HCD6 1990 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 OR6C6A6NF89 314 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 DYNC1I1O14576 645 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 ARPC3O15145 178 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 PHF1O43189 567 aaPredicted RBP9.04□□□□□ -0.96
COL6A3-214ENST00000493608 ICMTO60725 284 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 KRT36O76013 467 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 CCNB2O95067 398 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 HLA-DQA2P01906 255 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 TFP02787 698 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 HNF1AP20823 631 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 GSTM3P21266 225 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 CALB2P22676 271 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 CRABP1P29762 137 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 PYCR1P32322 319 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 HMGA2P52926 109 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 TEKQ02763 1124 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.04□□□□□ -0.96
COL6A3-214ENST00000493608 TRIM25Q14258 630 aaKnown RBP9.04□□□□□ -0.96
COL6A3-214ENST00000493608 HLXQ14774 488 aaPredicted RBP9.04□□□□□ -0.96
COL6A3-214ENST00000493608 KCNMB1Q16558 191 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 HFEQ30201 348 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 MTX3Q5HYI7 312 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 DNM1P34Q6PK57 102 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 Q6ZR03 302 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 GJC3Q8NFK1 279 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 OR4C15Q8NGM1 316 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 ZNRF4Q8WWF5 429 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 CCDC124Q96CT7 223 aaKnown RBP9.04□□□□□ -0.96
COL6A3-214ENST00000493608 C1orf159Q96HA4 380 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 PLA2G12AQ9BZM1 189 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 HIF1ANQ9NWT6 349 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 DCAF16Q9NXF7 216 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 PTTG3PQ9NZH4 202 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 PURGQ9UJV8 347 aaKnown RBP9.04□□□□□ -0.96
COL6A3-214ENST00000493608 WIPI2Q9Y4P8 454 aa9.04□□□□□ -0.96
COL6A3-214ENST00000493608 TVP23AA6NH52 213 aa9.03□□□□□ -0.96
COL6A3-214ENST00000493608 B4DSR2 109 aa9.03□□□□□ -0.96
COL6A3-214ENST00000493608 CLDN25C9JDP6 229 aa9.03□□□□□ -0.96
COL6A3-214ENST00000493608 RPS27P42677 84 aaKnown RBP9.03□□□□□ -0.96
COL6A3-214ENST00000493608 MAGEA2P43356 314 aa9.03□□□□□ -0.96
COL6A3-214ENST00000493608 DVL1P1P54792 670 aaPredicted RBP9.03□□□□□ -0.96
COL6A3-214ENST00000493608 TNFAIP6P98066 277 aaPredicted RBP9.03□□□□□ -0.96
COL6A3-214ENST00000493608 RSPO1Q2MKA7 263 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms