RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 TPRKBQ9Y3C4 175 aa14.92□□□□□ -0.02
LIME1-208ENST00000493265 PCDHGB1Q9Y5G3 927 aa14.92□□□□□ -0.02
LIME1-208ENST00000493265 LOC100509620A0A075B734 347 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 IRGMA1A4Y4 181 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 DPRXA6NFQ7 191 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 PRR32B1ATL7 298 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 ZNF878C9JN71 531 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 F5H5K5 113 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 PTHP01270 115 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 IGKV3-15P01624 115 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 ADRA2AP08913 450 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 CRYGSP22914 178 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 SSTR2P30874 369 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 ACTC1P68032 377 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 ACTA1P68133 377 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 MVKQ03426 396 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 ZNF85Q03923 595 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 BSPH1Q075Z2 132 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 SPOCK1Q08629 439 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 TBC1D28Q2M2D7 210 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 RBM48Q5RL73 367 aaKnown RBP14.91□□□□□ -0.02
LIME1-208ENST00000493265 KCTD18Q6PI47 426 aaPredicted RBP14.91□□□□□ -0.02
LIME1-208ENST00000493265 TMEM108Q6UXF1 575 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 SSX8Q7RTT4 187 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.91□□□□□ -0.02
LIME1-208ENST00000493265 PIAS4Q8N2W9 510 aaPredicted RBP14.91□□□□□ -0.02
LIME1-208ENST00000493265 FAM222BQ8WU58 562 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 SNX33Q8WV41 574 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 ASB17Q8WXJ9 295 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 MNTQ99583 582 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 KCNS3Q9BQ31 491 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 OR51B6Q9H340 312 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 CDH20Q9HBT6 801 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 MOV10Q9HCE1 1003 aaKnown RBP14.91□□□□□ -0.02
LIME1-208ENST00000493265 FGF20Q9NP95 211 aaPredicted RBP14.91□□□□□ -0.02
LIME1-208ENST00000493265 MRPS18AQ9NVS2 196 aaKnown RBP14.91□□□□□ -0.02
LIME1-208ENST00000493265 PAK1IP1Q9NWT1 392 aaPredicted RBP14.91□□□□□ -0.02
LIME1-208ENST00000493265 CNOT2Q9NZN8 540 aaKnown RBP14.91□□□□□ -0.02
LIME1-208ENST00000493265 ERVK-18Q9QC07 812 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 CRNNQ9UBG3 495 aaPredicted RBP14.91□□□□□ -0.02
LIME1-208ENST00000493265 FBXL3Q9UKT7 428 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 N6AMT1Q9Y5N5 214 aa14.91□□□□□ -0.02
LIME1-208ENST00000493265 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.9□□□□□ -0.02
LIME1-208ENST00000493265 OR6C6A6NF89 314 aa14.9□□□□□ -0.02
LIME1-208ENST00000493265 J3QRE1 110 aa14.9□□□□□ -0.02
LIME1-208ENST00000493265 PHYHO14832 338 aa14.9□□□□□ -0.02
LIME1-208ENST00000493265 IGLV1-44P01699 117 aa14.9□□□□□ -0.02
LIME1-208ENST00000493265 CCDC159P0C7I6 412 aa14.9□□□□□ -0.02
LIME1-208ENST00000493265 CRHBPP24387 322 aa14.9□□□□□ -0.02
LIME1-208ENST00000493265 CD40P25942 277 aa14.9□□□□□ -0.02
LIME1-208ENST00000493265 HSD11B1P28845 292 aa14.9□□□□□ -0.02
LIME1-208ENST00000493265 PRKXP51817 358 aa14.9□□□□□ -0.02
LIME1-208ENST00000493265 TP53I3Q53FA7 332 aa14.9□□□□□ -0.02
LIME1-208ENST00000493265 PAQR4Q8N4S7 273 aaPredicted RBP14.9□□□□□ -0.02
LIME1-208ENST00000493265 FAM169BQ8N8A8 192 aa14.9□□□□□ -0.02
LIME1-208ENST00000493265 RNF133Q8WVZ7 376 aa14.9□□□□□ -0.02
LIME1-208ENST00000493265 MYDGFQ969H8 173 aa14.9□□□□□ -0.02
LIME1-208ENST00000493265 COQ7Q99807 217 aa14.9□□□□□ -0.02
LIME1-208ENST00000493265 CCDC90BQ9GZT6 254 aa14.9□□□□□ -0.02
LIME1-208ENST00000493265 ESRP2Q9H6T0 727 aaKnown RBP14.9□□□□□ -0.02
LIME1-208ENST00000493265 ELOVL3Q9HB03 270 aa14.9□□□□□ -0.02
LIME1-208ENST00000493265 LRCH1Q9Y2L9 728 aa14.9□□□□□ -0.02
LIME1-208ENST00000493265 GRIP1Q9Y3R0 1128 aa14.9□□□□□ -0.02
LIME1-208ENST00000493265 J3QLW9 94 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 ABCD4O14678 606 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 IGHA1P01876 353 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 PIPP12273 146 aaPredicted RBP14.89□□□□□ -0.03
LIME1-208ENST00000493265 ZNF19P17023 458 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 MYL12AP19105 171 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 PAX7P23759 505 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 PTAFRP25105 342 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 DCKP27707 260 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 C21orf33P30042 268 aaPredicted RBP14.89□□□□□ -0.03
LIME1-208ENST00000493265 CALCRP30988 508 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 OPRL1P41146 370 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 SLC6A9P48067 706 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 ETV1P50549 477 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 NAAAQ02083 359 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 ECH1Q13011 328 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 BEX5Q5H9J7 111 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 C1QTNF12Q5T7M4 302 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 PLEKHG7Q6ZR37 379 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 CDH24Q86UP0 819 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 ZNF283Q8N7M2 679 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 YIPF7Q8N8F6 280 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 OR1J2Q8NGS2 313 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 SPTSSAQ969W0 71 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 POM121L2Q96KW2 1035 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 OR8B4Q96RC9 309 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 SPOCK3Q9BQ16 436 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 ALG8Q9BVK2 526 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 MROQ9BYG7 248 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 BRD7Q9NPI1 651 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 CHCHD3Q9NX63 227 aaKnown RBP14.89□□□□□ -0.03
LIME1-208ENST00000493265 ERVK13-1Q9NX77 482 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 CLEC2DQ9UHP7 191 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 GNG8Q9UK08 70 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 BLOC1S6Q9UL45 172 aa14.89□□□□□ -0.03
LIME1-208ENST00000493265 DIMT1Q9UNQ2 313 aaKnown RBP14.89□□□□□ -0.03
LIME1-208ENST00000493265 LRP12Q9Y561 859 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms