RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 ATPIF1Q9UII2 106 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 ZDHHC8Q9ULC8 765 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 CDH10Q9Y6N8 788 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 OR6C68A6NDL8 312 aa12.71□□□□□ -0.37
TOM1-215ENST00000491987 IDH3BO43837 385 aa12.71□□□□□ -0.37
TOM1-215ENST00000491987 CCNB2O95067 398 aa12.71□□□□□ -0.37
TOM1-215ENST00000491987 CD55P08174 381 aa12.71□□□□□ -0.37
TOM1-215ENST00000491987 KITLGP21583 273 aa12.71□□□□□ -0.37
TOM1-215ENST00000491987 PCMT1P22061 227 aa12.71□□□□□ -0.37
TOM1-215ENST00000491987 TUBG1P23258 451 aa12.71□□□□□ -0.37
TOM1-215ENST00000491987 THBS2P35442 1172 aa12.71□□□□□ -0.37
TOM1-215ENST00000491987 HMGA2P52926 109 aa12.71□□□□□ -0.37
TOM1-215ENST00000491987 MS4A2Q01362 244 aa12.71□□□□□ -0.37
TOM1-215ENST00000491987 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.71□□□□□ -0.37
TOM1-215ENST00000491987 COX10Q12887 443 aa12.71□□□□□ -0.37
TOM1-215ENST00000491987 CDK5R2Q13319 367 aa12.71□□□□□ -0.37
TOM1-215ENST00000491987 Q6ZR03 302 aa12.71□□□□□ -0.37
TOM1-215ENST00000491987 ZNF771Q7L3S4 317 aaPredicted RBP12.71□□□□□ -0.37
TOM1-215ENST00000491987 ZBTB46Q86UZ6 589 aa12.71□□□□□ -0.37
TOM1-215ENST00000491987 DHFR2Q86XF0 187 aa12.71□□□□□ -0.37
TOM1-215ENST00000491987 OR2Z1Q8NG97 314 aa12.71□□□□□ -0.37
TOM1-215ENST00000491987 OR52L1Q8NGH7 329 aa12.71□□□□□ -0.37
TOM1-215ENST00000491987 DCLRE1CQ96SD1 692 aaKnown RBP12.71□□□□□ -0.37
TOM1-215ENST00000491987 COQ7Q99807 217 aa12.71□□□□□ -0.37
TOM1-215ENST00000491987 PLA2G12AQ9BZM1 189 aa12.71□□□□□ -0.37
TOM1-215ENST00000491987 TRIM15Q9C019 465 aa12.71□□□□□ -0.37
TOM1-215ENST00000491987 MUC13Q9H3R2 512 aa12.71□□□□□ -0.37
TOM1-215ENST00000491987 TUBG2Q9NRH3 451 aa12.71□□□□□ -0.37
TOM1-215ENST00000491987 DCAF16Q9NXF7 216 aa12.71□□□□□ -0.37
TOM1-215ENST00000491987 VNN3Q9NY84 501 aa12.71□□□□□ -0.37
TOM1-215ENST00000491987 ISPDA4D126 451 aa12.7□□□□□ -0.38
TOM1-215ENST00000491987 DEAF1O75398 565 aaPredicted RBP12.7□□□□□ -0.38
TOM1-215ENST00000491987 GASTP01350 101 aa12.7□□□□□ -0.38
TOM1-215ENST00000491987 IGHV2-5P01817 119 aa12.7□□□□□ -0.38
TOM1-215ENST00000491987 HLA-DQA2P01906 255 aa12.7□□□□□ -0.38
TOM1-215ENST00000491987 T-ENOLP0DO92 83 aa12.7□□□□□ -0.38
TOM1-215ENST00000491987 TNFSF4P23510 183 aa12.7□□□□□ -0.38
TOM1-215ENST00000491987 RGS6P49758 472 aa12.7□□□□□ -0.38
TOM1-215ENST00000491987 SLC3A1Q07837 685 aa12.7□□□□□ -0.38
TOM1-215ENST00000491987 TRIM25Q14258 630 aaKnown RBP12.7□□□□□ -0.38
TOM1-215ENST00000491987 KRTAP24-1Q3LI83 254 aa12.7□□□□□ -0.38
TOM1-215ENST00000491987 SLC36A3Q495N2 470 aa12.7□□□□□ -0.38
TOM1-215ENST00000491987 ZNF770Q6IQ21 691 aaPredicted RBP12.7□□□□□ -0.38
TOM1-215ENST00000491987 SLC18B1Q6NT16 456 aa12.7□□□□□ -0.38
TOM1-215ENST00000491987 RPL13AP3Q6NVV1 102 aa12.7□□□□□ -0.38
TOM1-215ENST00000491987 CFAP77Q6ZQR2 320 aa12.7□□□□□ -0.38
TOM1-215ENST00000491987 OR5AS1Q8N127 324 aa12.7□□□□□ -0.38
TOM1-215ENST00000491987 LINC00471Q8N535 108 aa12.7□□□□□ -0.38
TOM1-215ENST00000491987 CYB561A3Q8NBI2 242 aa12.7□□□□□ -0.38
TOM1-215ENST00000491987 AQP11Q8NBQ7 271 aa12.7□□□□□ -0.38
TOM1-215ENST00000491987 OR8D4Q8NGM9 314 aa12.7□□□□□ -0.38
TOM1-215ENST00000491987 PTP4A1Q93096 173 aa12.7□□□□□ -0.38
TOM1-215ENST00000491987 CCDC124Q96CT7 223 aaKnown RBP12.7□□□□□ -0.38
TOM1-215ENST00000491987 HAVCR1Q96D42 359 aa12.7□□□□□ -0.38
TOM1-215ENST00000491987 RAB39BQ96DA2 213 aa12.7□□□□□ -0.38
TOM1-215ENST00000491987 GAL3ST1Q99999 423 aa12.7□□□□□ -0.38
TOM1-215ENST00000491987 CDADC1Q9BWV3 514 aa12.7□□□□□ -0.38
TOM1-215ENST00000491987 MAGIXQ9H6Y5 334 aa12.7□□□□□ -0.38
TOM1-215ENST00000491987 U3KQV3 271 aa12.7□□□□□ -0.38
TOM1-215ENST00000491987 J3QW42 95 aa12.69□□□□□ -0.38
TOM1-215ENST00000491987 BHLHE40O14503 412 aa12.69□□□□□ -0.38
TOM1-215ENST00000491987 DYNC1I1O14576 645 aa12.69□□□□□ -0.38
TOM1-215ENST00000491987 RAC2P15153 192 aa12.69□□□□□ -0.38
TOM1-215ENST00000491987 PYCR1P32322 319 aa12.69□□□□□ -0.38
TOM1-215ENST00000491987 RBMXP38159 391 aaKnown RBP12.69□□□□□ -0.38
TOM1-215ENST00000491987 HLXQ14774 488 aaPredicted RBP12.69□□□□□ -0.38
TOM1-215ENST00000491987 FAM98BQ52LJ0 330 aaKnown RBP12.69□□□□□ -0.38
TOM1-215ENST00000491987 ACSM5Q6NUN0 579 aa12.69□□□□□ -0.38
TOM1-215ENST00000491987 RASSF6Q6ZTQ3 369 aa12.69□□□□□ -0.38
TOM1-215ENST00000491987 OR2AJ1Q8NGZ0 328 aa12.69□□□□□ -0.38
TOM1-215ENST00000491987 APOBEC3DQ96AK3 386 aaPredicted RBP12.69□□□□□ -0.38
TOM1-215ENST00000491987 CLPTM1LQ96KA5 538 aa12.69□□□□□ -0.38
TOM1-215ENST00000491987 PITX2Q99697 317 aa12.69□□□□□ -0.38
TOM1-215ENST00000491987 WDR76Q9H967 626 aa12.69□□□□□ -0.38
TOM1-215ENST00000491987 TBC1D23Q9NUY8 699 aa12.69□□□□□ -0.38
TOM1-215ENST00000491987 PRPF19Q9UMS4 504 aaKnown RBP12.69□□□□□ -0.38
TOM1-215ENST00000491987 SAMHD1Q9Y3Z3 626 aaKnown RBP12.69□□□□□ -0.38
TOM1-215ENST00000491987 COL6A5A8TX70 2615 aa12.69□□□□□ -0.38
TOM1-215ENST00000491987 MXRA5Q9NR99 2828 aa12.69□□□□□ -0.38
TOM1-215ENST00000491987 TRAV20A0A0B4J274 112 aa12.68□□□□□ -0.38
TOM1-215ENST00000491987 PLPP2O43688 288 aa12.68□□□□□ -0.38
TOM1-215ENST00000491987 SOX14O95416 240 aa12.68□□□□□ -0.38
TOM1-215ENST00000491987 ANPEPP15144 967 aa12.68□□□□□ -0.38
TOM1-215ENST00000491987 GGT2P36268 569 aa12.68□□□□□ -0.38
TOM1-215ENST00000491987 RSPO1Q2MKA7 263 aaPredicted RBP12.68□□□□□ -0.38
TOM1-215ENST00000491987 OR2T5Q6IEZ7 315 aa12.68□□□□□ -0.38
TOM1-215ENST00000491987 OR2T2Q6IF00 324 aa12.68□□□□□ -0.38
TOM1-215ENST00000491987 SHQ1Q6PI26 577 aaKnown RBP12.68□□□□□ -0.38
TOM1-215ENST00000491987 FBXW12Q6X9E4 464 aa12.68□□□□□ -0.38
TOM1-215ENST00000491987 PEG10Q86TG7 708 aaKnown RBP12.68□□□□□ -0.38
TOM1-215ENST00000491987 PROKR2Q8NFJ6 384 aa12.68□□□□□ -0.38
TOM1-215ENST00000491987 OR5L1Q8NGL2 311 aa12.68□□□□□ -0.38
TOM1-215ENST00000491987 OR2T29Q8NH02 315 aa12.68□□□□□ -0.38
TOM1-215ENST00000491987 ITLN1Q8WWA0 313 aa12.68□□□□□ -0.38
TOM1-215ENST00000491987 ATF6BQ99941 703 aa12.68□□□□□ -0.38
TOM1-215ENST00000491987 TSSK6Q9BXA6 273 aa12.68□□□□□ -0.38
TOM1-215ENST00000491987 REEP1Q9H902 201 aa12.68□□□□□ -0.38
TOM1-215ENST00000491987 TMEM106BQ9NUM4 274 aa12.68□□□□□ -0.38
TOM1-215ENST00000491987 MRPL22Q9NWU5 206 aaKnown RBP12.68□□□□□ -0.38
TOM1-215ENST00000491987 TAS2R1Q9NYW7 299 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms