RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 C16orf97H3BN30 126 aa18.95■□□□□ 0.62
VCPKMT-204ENST00000491402 SYNGR3O43761 229 aa18.95■□□□□ 0.62
VCPKMT-204ENST00000491402 UBE2UQ5VVX9 321 aa18.95■□□□□ 0.62
VCPKMT-204ENST00000491402 TMEM53Q6P2H8 277 aa18.95■□□□□ 0.62
VCPKMT-204ENST00000491402 DEGS2Q6QHC5 323 aa18.95■□□□□ 0.62
VCPKMT-204ENST00000491402 KCTD20Q7Z5Y7 419 aa18.95■□□□□ 0.62
VCPKMT-204ENST00000491402 OBP2BQ9NPH6 170 aa18.95■□□□□ 0.62
VCPKMT-204ENST00000491402 ZNF254O75437 659 aa18.94■□□□□ 0.62
VCPKMT-204ENST00000491402 CLDN14O95500 239 aa18.94■□□□□ 0.62
VCPKMT-204ENST00000491402 H2BFMP0C1H6 154 aa18.94■□□□□ 0.62
VCPKMT-204ENST00000491402 TIMM23BQ5SRD1 257 aa18.94■□□□□ 0.62
VCPKMT-204ENST00000491402 ZNF367Q7RTV3 350 aa18.94■□□□□ 0.62
VCPKMT-204ENST00000491402 MDP1Q86V88 176 aa18.94■□□□□ 0.62
VCPKMT-204ENST00000491402 YIPF7Q8N8F6 280 aa18.94■□□□□ 0.62
VCPKMT-204ENST00000491402 PELI1Q96FA3 418 aa18.94■□□□□ 0.62
VCPKMT-204ENST00000491402 OR6C6A6NF89 314 aa18.93■□□□□ 0.62
VCPKMT-204ENST00000491402 INMTO95050 263 aa18.93■□□□□ 0.62
VCPKMT-204ENST00000491402 TACSTD2P09758 323 aa18.93■□□□□ 0.62
VCPKMT-204ENST00000491402 RIDAP52758 137 aaKnown RBP18.93■□□□□ 0.62
VCPKMT-204ENST00000491402 LIPNQ5VXI9 398 aa18.93■□□□□ 0.62
VCPKMT-204ENST00000491402 P2RY8Q86VZ1 359 aa18.93■□□□□ 0.62
VCPKMT-204ENST00000491402 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.93■□□□□ 0.62
VCPKMT-204ENST00000491402 EGFL6Q8IUX8 553 aa18.93■□□□□ 0.62
VCPKMT-204ENST00000491402 ALDH16A1Q8IZ83 802 aa18.93■□□□□ 0.62
VCPKMT-204ENST00000491402 CPEB3Q8NE35 698 aaKnown RBP18.93■□□□□ 0.62
VCPKMT-204ENST00000491402 OR1F12Q8NHA8 337 aa18.93■□□□□ 0.62
VCPKMT-204ENST00000491402 RORBQ92753 470 aa18.93■□□□□ 0.62
VCPKMT-204ENST00000491402 KCNJ16Q9NPI9 418 aa18.93■□□□□ 0.62
VCPKMT-204ENST00000491402 FBXL3Q9UKT7 428 aa18.93■□□□□ 0.62
VCPKMT-204ENST00000491402 AMDHD2Q9Y303 409 aa18.93■□□□□ 0.62
VCPKMT-204ENST00000491402 LALBAP00709 142 aa18.93■□□□□ 0.62
VCPKMT-204ENST00000491402 TFAP2AP05549 437 aa18.93■□□□□ 0.62
VCPKMT-204ENST00000491402 HTR5AP47898 357 aa18.93■□□□□ 0.62
VCPKMT-204ENST00000491402 GRB2P62993 217 aaKnown RBP18.93■□□□□ 0.62
VCPKMT-204ENST00000491402 TAF13Q15543 124 aa18.93■□□□□ 0.62
VCPKMT-204ENST00000491402 KLBQ86Z14 1044 aa18.93■□□□□ 0.62
VCPKMT-204ENST00000491402 RNASE6Q93091 150 aaKnown RBP18.93■□□□□ 0.62
VCPKMT-204ENST00000491402 ZNF75AQ96N20 296 aa18.93■□□□□ 0.62
VCPKMT-204ENST00000491402 USB1Q9BQ65 265 aaKnown RBP18.93■□□□□ 0.62
VCPKMT-204ENST00000491402 BABAM2Q9NXR7 383 aa18.93■□□□□ 0.62
VCPKMT-204ENST00000491402 SLC25A15Q9Y619 301 aa18.93■□□□□ 0.62
VCPKMT-204ENST00000491402 USP9YO00507 2555 aaPredicted RBP18.92■□□□□ 0.62
VCPKMT-204ENST00000491402 RPP14O95059 124 aaKnown RBP18.92■□□□□ 0.62
VCPKMT-204ENST00000491402 HSMCR30P0CW71 290 aa18.92■□□□□ 0.62
VCPKMT-204ENST00000491402 HSD11B1P28845 292 aa18.92■□□□□ 0.62
VCPKMT-204ENST00000491402 ECH1Q13011 328 aa18.92■□□□□ 0.62
VCPKMT-204ENST00000491402 ZNF584Q8IVC4 421 aa18.92■□□□□ 0.62
VCPKMT-204ENST00000491402 SLC7A6Q92536 515 aa18.92■□□□□ 0.62
VCPKMT-204ENST00000491402 MUL1Q969V5 352 aa18.92■□□□□ 0.62
VCPKMT-204ENST00000491402 MGLLQ99685 303 aa18.92■□□□□ 0.62
VCPKMT-204ENST00000491402 COQ7Q99807 217 aa18.92■□□□□ 0.62
VCPKMT-204ENST00000491402 OR10A4Q9H209 315 aa18.92■□□□□ 0.62
VCPKMT-204ENST00000491402 TRIM36Q9NQ86 728 aa18.92■□□□□ 0.62
VCPKMT-204ENST00000491402 E9PI62 339 aa18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 JUNBP17275 347 aaPredicted RBP18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 PSMB9P28065 219 aa18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 NR1H2P55055 460 aa18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 GALK2Q01415 458 aa18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 PLP2Q04941 152 aa18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 RAB39AQ14964 217 aa18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 TAB1Q15750 504 aa18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 SYT6Q5T7P8 510 aaPredicted RBP18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 RNF166Q96A37 237 aaPredicted RBP18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 COG8Q96MW5 612 aa18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 ATPIF1Q9UII2 106 aa18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 GRIP1Q9Y3R0 1128 aa18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 HCFC1P51610 2035 aa18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 IGKV3-15P01624 115 aa18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 DBHP09172 617 aa18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 CRYGSP22914 178 aa18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 APEX1P27695 318 aaKnown RBP18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 OTX1P32242 354 aaPredicted RBP18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 PSMB10P40306 273 aa18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 GTF2A1P52655 376 aaPredicted RBP18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 GBX2P52951 348 aaPredicted RBP18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 ACSM1Q08AH1 577 aa18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 TIGD6Q17RP2 521 aa18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 RSPO1Q2MKA7 263 aaPredicted RBP18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 HSD17B8Q92506 261 aa18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 MUCL1Q96DR8 90 aa18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 LRRC46Q96FV0 321 aa18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 MS4A3Q96HJ5 214 aa18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 KCNJ15Q99712 375 aa18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 NIPAL2Q9H841 368 aa18.91■□□□□ 0.62
VCPKMT-204ENST00000491402 IQCMA0A1B0GVH7 501 aa18.9■□□□□ 0.62
VCPKMT-204ENST00000491402 F5H5K5 113 aa18.9■□□□□ 0.62
VCPKMT-204ENST00000491402 SERPINA5P05154 406 aa18.9■□□□□ 0.62
VCPKMT-204ENST00000491402 COX5BP10606 129 aa18.9■□□□□ 0.62
VCPKMT-204ENST00000491402 CBR1P16152 277 aa18.9■□□□□ 0.62
VCPKMT-204ENST00000491402 ZNF14P17017 642 aaPredicted RBP18.9■□□□□ 0.62
VCPKMT-204ENST00000491402 DCTDP32321 178 aa18.9■□□□□ 0.62
VCPKMT-204ENST00000491402 GP2P55259 537 aaKnown RBP18.9■□□□□ 0.62
VCPKMT-204ENST00000491402 BDH1Q02338 343 aa18.9■□□□□ 0.62
VCPKMT-204ENST00000491402 TFF3Q07654 80 aa18.9■□□□□ 0.62
VCPKMT-204ENST00000491402 MLLT11Q13015 90 aaPredicted RBP18.9■□□□□ 0.62
VCPKMT-204ENST00000491402 PPA1Q15181 289 aa18.9■□□□□ 0.62
VCPKMT-204ENST00000491402 C22orf34Q6ZV56 151 aa18.9■□□□□ 0.62
VCPKMT-204ENST00000491402 SPTSSAQ969W0 71 aa18.9■□□□□ 0.62
VCPKMT-204ENST00000491402 OPALINQ96PE5 141 aa18.9■□□□□ 0.62
VCPKMT-204ENST00000491402 SRSF10O75494 262 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms