RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 TRAV17A0A0B4J275 112 aa20.25■□□□□ 0.83
USF3-203ENST00000491165 APEHP13798 732 aaKnown RBP20.25■□□□□ 0.83
USF3-203ENST00000491165 ALKBH1Q13686 389 aaKnown RBP20.25■□□□□ 0.83
USF3-203ENST00000491165 ZNF74Q16587 644 aa20.25■□□□□ 0.83
USF3-203ENST00000491165 OLFML2AQ68BL7 652 aa20.25■□□□□ 0.83
USF3-203ENST00000491165 GPR139Q6DWJ6 353 aa20.25■□□□□ 0.83
USF3-203ENST00000491165 EXD3Q8N9H8 876 aa20.25■□□□□ 0.83
USF3-203ENST00000491165 TMEM178AQ8NBL3 297 aa20.25■□□□□ 0.83
USF3-203ENST00000491165 LSM14AQ8ND56 463 aaKnown RBP20.25■□□□□ 0.83
USF3-203ENST00000491165 HAVCR1Q96D42 359 aa20.25■□□□□ 0.83
USF3-203ENST00000491165 MAP6Q96JE9 813 aa20.25■□□□□ 0.83
USF3-203ENST00000491165 ADAD1Q96M93 576 aaKnown RBP20.25■□□□□ 0.83
USF3-203ENST00000491165 TSSK2Q96PF2 358 aa20.25■□□□□ 0.83
USF3-203ENST00000491165 PTGES2Q9H7Z7 377 aa20.25■□□□□ 0.83
USF3-203ENST00000491165 LUZP4Q9P127 313 aa20.25■□□□□ 0.83
USF3-203ENST00000491165 ETV7Q9Y603 341 aa20.25■□□□□ 0.83
USF3-203ENST00000491165 DNAJC13O75165 2243 aa20.25■□□□□ 0.83
USF3-203ENST00000491165 KALRNO60229 2985 aa20.25■□□□□ 0.83
USF3-203ENST00000491165 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 ANKRD20A5PA0PJZ0 165 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 FAM166BA8MTA8 275 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 KLRC4-KLRK1H3BQV0 150 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 ETV2O00321 342 aaPredicted RBP20.24■□□□□ 0.83
USF3-203ENST00000491165 ARPC1BO15143 372 aaKnown RBP20.24■□□□□ 0.83
USF3-203ENST00000491165 UPK3AO75631 287 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 WISP2O76076 250 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 GLSO94925 669 aaPredicted RBP20.24■□□□□ 0.83
USF3-203ENST00000491165 SDHAP31040 664 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 MAGEA5P43359 124 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 ART1P52961 327 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 BLVRAP53004 296 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 EXOSC2Q13868 293 aaKnown RBP20.24■□□□□ 0.83
USF3-203ENST00000491165 ALG10Q5BKT4 473 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 Q6ZTK2 550 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 OR6V1Q8N148 313 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 LIPHQ8WWY8 451 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 MIB2Q96AX9 1013 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 CNTNAP3BQ96NU0 1288 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 CNTNAP3Q9BZ76 1288 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 GLTPQ9NZD2 209 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 MRM2Q9UI43 246 aaKnown RBP20.24■□□□□ 0.83
USF3-203ENST00000491165 ZNF346Q9UL40 294 aaKnown RBP20.24■□□□□ 0.83
USF3-203ENST00000491165 BOKQ9UMX3 212 aaPredicted RBP20.24■□□□□ 0.83
USF3-203ENST00000491165 KLHDC2Q9Y2U9 406 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 G3V3Q6 166 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 SHOXO15266 292 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 MPC2O95563 127 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 ZNF41P51814 821 aaPredicted RBP20.24■□□□□ 0.83
USF3-203ENST00000491165 DSCR4P56555 118 aaPredicted RBP20.24■□□□□ 0.83
USF3-203ENST00000491165 CTXN1P60606 82 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 ZNF169Q14929 603 aaPredicted RBP20.24■□□□□ 0.83
USF3-203ENST00000491165 LIPNQ5VXI9 398 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 ADGRG3Q86Y34 549 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 LRRC75AQ8NAA5 344 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 C15orf40Q8WUR7 153 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 NSMAFQ92636 917 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 DNAJA3Q96EY1 480 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 MOGAT1Q96PD6 335 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 UBQLN2Q9UHD9 624 aa20.24■□□□□ 0.83
USF3-203ENST00000491165 ACOT7O00154 380 aa20.23■□□□□ 0.83
USF3-203ENST00000491165 TOXO94900 526 aa20.23■□□□□ 0.83
USF3-203ENST00000491165 CDK2P24941 298 aa20.23■□□□□ 0.83
USF3-203ENST00000491165 GDF1P27539 372 aa20.23■□□□□ 0.83
USF3-203ENST00000491165 EGR4Q05215 589 aa20.23■□□□□ 0.83
USF3-203ENST00000491165 TOMM20Q15388 145 aa20.23■□□□□ 0.83
USF3-203ENST00000491165 GRINAQ7Z429 371 aa20.23■□□□□ 0.83
USF3-203ENST00000491165 YRDCQ86U90 279 aaKnown RBP20.23■□□□□ 0.83
USF3-203ENST00000491165 TMEM251Q8N6I4 163 aa20.23■□□□□ 0.83
USF3-203ENST00000491165 ST8SIA1Q92185 356 aa20.23■□□□□ 0.83
USF3-203ENST00000491165 NOX3Q9HBY0 568 aa20.23■□□□□ 0.83
USF3-203ENST00000491165 NPDC1Q9NQX5 325 aaPredicted RBP20.23■□□□□ 0.83
USF3-203ENST00000491165 FRRS1LQ9P0K9 344 aa20.23■□□□□ 0.83
USF3-203ENST00000491165 GP1BBP13224 206 aa20.23■□□□□ 0.83
USF3-203ENST00000491165 MNDAP41218 407 aa20.23■□□□□ 0.83
USF3-203ENST00000491165 DLX5P56178 289 aa20.23■□□□□ 0.83
USF3-203ENST00000491165 PLEKHN1Q494U1 663 aaPredicted RBP20.23■□□□□ 0.83
USF3-203ENST00000491165 FTMTQ8N4E7 242 aa20.23■□□□□ 0.83
USF3-203ENST00000491165 TAAR6Q96RI8 345 aa20.23■□□□□ 0.83
USF3-203ENST00000491165 FBXL3Q9UKT7 428 aa20.23■□□□□ 0.83
USF3-203ENST00000491165 LHX6Q9UPM6 363 aa20.23■□□□□ 0.83
USF3-203ENST00000491165 TRBV5-5A0A0J9YX44 114 aa20.22■□□□□ 0.83
USF3-203ENST00000491165 ADRA2CP18825 462 aa20.22■□□□□ 0.83
USF3-203ENST00000491165 SOX2P48431 317 aa20.22■□□□□ 0.83
USF3-203ENST00000491165 PUDPQ08623 228 aa20.22■□□□□ 0.83
USF3-203ENST00000491165 POU4F3Q15319 338 aa20.22■□□□□ 0.83
USF3-203ENST00000491165 SLC25A53Q5H9E4 307 aa20.22■□□□□ 0.83
USF3-203ENST00000491165 CLLU1Q5K131 121 aa20.22■□□□□ 0.83
USF3-203ENST00000491165 LRRN1Q6UXK5 716 aa20.22■□□□□ 0.83
USF3-203ENST00000491165 GLDNQ6ZMI3 551 aaPredicted RBP20.22■□□□□ 0.83
USF3-203ENST00000491165 CDC20BQ86Y33 519 aa20.22■□□□□ 0.83
USF3-203ENST00000491165 DKKL1Q9UK85 242 aa20.22■□□□□ 0.83
USF3-203ENST00000491165 ABHD16AO95870 558 aa20.21■□□□□ 0.83
USF3-203ENST00000491165 SRD5A2P31213 254 aa20.21■□□□□ 0.83
USF3-203ENST00000491165 RAD52P43351 418 aa20.21■□□□□ 0.83
USF3-203ENST00000491165 TAS2R20P59543 309 aa20.21■□□□□ 0.83
USF3-203ENST00000491165 WIPI1Q5MNZ9 446 aaPredicted RBP20.21■□□□□ 0.83
USF3-203ENST00000491165 TMEM234Q8WY98 164 aa20.21■□□□□ 0.83
USF3-203ENST00000491165 SEC22CQ9BRL7 303 aa20.21■□□□□ 0.83
USF3-203ENST00000491165 SRA1Q9HD15 236 aaKnown RBP20.21■□□□□ 0.83
USF3-203ENST00000491165 GRHPRQ9UBQ7 328 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms