RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 EGFL6Q8IUX8 553 aa13.67□□□□□ -0.22
TRA2A-208ENST00000490942 OR10S1Q8NGN2 331 aa13.67□□□□□ -0.22
TRA2A-208ENST00000490942 UBE2FQ969M7 185 aa13.67□□□□□ -0.22
TRA2A-208ENST00000490942 SLAMF6Q96DU3 332 aa13.67□□□□□ -0.22
TRA2A-208ENST00000490942 C4orf45Q96LM5 186 aa13.67□□□□□ -0.22
TRA2A-208ENST00000490942 LURAP1Q96LR2 239 aa13.67□□□□□ -0.22
TRA2A-208ENST00000490942 MYCBPQ99417 103 aaPredicted RBP13.67□□□□□ -0.22
TRA2A-208ENST00000490942 NIPAL2Q9H841 368 aa13.67□□□□□ -0.22
TRA2A-208ENST00000490942 MRPS18AQ9NVS2 196 aaKnown RBP13.67□□□□□ -0.22
TRA2A-208ENST00000490942 DNAJC27Q9NZQ0 273 aa13.67□□□□□ -0.22
TRA2A-208ENST00000490942 HEATR1Q9H583 2144 aaKnown RBP13.67□□□□□ -0.22
TRA2A-208ENST00000490942 SMPD2O60906 423 aa13.66□□□□□ -0.22
TRA2A-208ENST00000490942 ZNF254O75437 659 aa13.66□□□□□ -0.22
TRA2A-208ENST00000490942 OR2T7P0C7T2 308 aa13.66□□□□□ -0.22
TRA2A-208ENST00000490942 DANCRP0C864 163 aa13.66□□□□□ -0.22
TRA2A-208ENST00000490942 PSKH1P11801 424 aa13.66□□□□□ -0.22
TRA2A-208ENST00000490942 TTKP33981 857 aa13.66□□□□□ -0.22
TRA2A-208ENST00000490942 AQP4P55087 323 aa13.66□□□□□ -0.22
TRA2A-208ENST00000490942 TPTEP56180 551 aa13.66□□□□□ -0.22
TRA2A-208ENST00000490942 ACTC1P68032 377 aa13.66□□□□□ -0.22
TRA2A-208ENST00000490942 ACTA1P68133 377 aa13.66□□□□□ -0.22
TRA2A-208ENST00000490942 IL5RAQ01344 420 aa13.66□□□□□ -0.22
TRA2A-208ENST00000490942 SNTB2Q13425 540 aaKnown RBP13.66□□□□□ -0.22
TRA2A-208ENST00000490942 AGAP6Q5VW22 663 aa13.66□□□□□ -0.22
TRA2A-208ENST00000490942 DRAM2Q6UX65 266 aa13.66□□□□□ -0.22
TRA2A-208ENST00000490942 COLCA1Q6ZS62 124 aa13.66□□□□□ -0.22
TRA2A-208ENST00000490942 C8orf59Q8N0T1 100 aaPredicted RBP13.66□□□□□ -0.22
TRA2A-208ENST00000490942 PAQR4Q8N4S7 273 aaPredicted RBP13.66□□□□□ -0.22
TRA2A-208ENST00000490942 OR2T27Q8NH04 317 aa13.66□□□□□ -0.22
TRA2A-208ENST00000490942 SMAP2Q8WU79 429 aaPredicted RBP13.66□□□□□ -0.22
TRA2A-208ENST00000490942 FBLIM1Q8WUP2 373 aa13.66□□□□□ -0.22
TRA2A-208ENST00000490942 TMEM171Q8WVE6 324 aa13.66□□□□□ -0.22
TRA2A-208ENST00000490942 APH1BQ8WW43 257 aa13.66□□□□□ -0.22
TRA2A-208ENST00000490942 IGFBPL1Q8WX77 278 aa13.66□□□□□ -0.22
TRA2A-208ENST00000490942 PIGTQ969N2 578 aa13.66□□□□□ -0.22
TRA2A-208ENST00000490942 APOBEC3DQ96AK3 386 aaPredicted RBP13.66□□□□□ -0.22
TRA2A-208ENST00000490942 KCNJ15Q99712 375 aa13.66□□□□□ -0.22
TRA2A-208ENST00000490942 SP140LQ9H930 580 aa13.66□□□□□ -0.22
TRA2A-208ENST00000490942 LAMP5Q9UJQ1 280 aa13.66□□□□□ -0.22
TRA2A-208ENST00000490942 RPL36Q9Y3U8 105 aaKnown RBP13.66□□□□□ -0.22
TRA2A-208ENST00000490942 RAI1Q7Z5J4 1906 aaPredicted RBP13.66□□□□□ -0.22
TRA2A-208ENST00000490942 SPG11Q96JI7 2443 aa13.65□□□□□ -0.22
TRA2A-208ENST00000490942 IRGMA1A4Y4 181 aa13.65□□□□□ -0.22
TRA2A-208ENST00000490942 WBP4O75554 376 aaKnown RBP13.65□□□□□ -0.22
TRA2A-208ENST00000490942 ABHD16AO95870 558 aa13.65□□□□□ -0.22
TRA2A-208ENST00000490942 BMP4P12644 408 aa13.65□□□□□ -0.22
TRA2A-208ENST00000490942 CCL2P13500 99 aa13.65□□□□□ -0.22
TRA2A-208ENST00000490942 CCNOP22674 350 aa13.65□□□□□ -0.22
TRA2A-208ENST00000490942 OPRL1P41146 370 aa13.65□□□□□ -0.22
TRA2A-208ENST00000490942 WNT5AP41221 380 aa13.65□□□□□ -0.22
TRA2A-208ENST00000490942 NAA10P41227 235 aaPredicted RBP13.65□□□□□ -0.22
TRA2A-208ENST00000490942 RPS27P42677 84 aaKnown RBP13.65□□□□□ -0.22
TRA2A-208ENST00000490942 KRTAP10-9P60411 292 aa13.65□□□□□ -0.22
TRA2A-208ENST00000490942 EGR3Q06889 387 aa13.65□□□□□ -0.22
TRA2A-208ENST00000490942 RAB40BQ12829 278 aa13.65□□□□□ -0.22
TRA2A-208ENST00000490942 RSPO1Q2MKA7 263 aaPredicted RBP13.65□□□□□ -0.22
TRA2A-208ENST00000490942 FBXL14Q8N1E6 418 aa13.65□□□□□ -0.22
TRA2A-208ENST00000490942 OR51G2Q8NGK0 314 aa13.65□□□□□ -0.22
TRA2A-208ENST00000490942 OR5L1Q8NGL2 311 aa13.65□□□□□ -0.22
TRA2A-208ENST00000490942 COPS4Q9BT78 406 aa13.65□□□□□ -0.22
TRA2A-208ENST00000490942 C1QTNF5Q9BXJ0 243 aa13.65□□□□□ -0.22
TRA2A-208ENST00000490942 UBTD1Q9HAC8 227 aa13.65□□□□□ -0.22
TRA2A-208ENST00000490942 CBLN4Q9NTU7 201 aa13.65□□□□□ -0.22
TRA2A-208ENST00000490942 EXOGQ9Y2C4 368 aaKnown RBP13.65□□□□□ -0.22
TRA2A-208ENST00000490942 CMAHPQ9Y471 501 aa13.65□□□□□ -0.22
TRA2A-208ENST00000490942 B9A039 149 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 J3QRE1 110 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 M0R135 149 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 RAF1P04049 648 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 ACSM4P0C7M7 580 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 ZNF250P15622 560 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 THBS4P35443 961 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 ATP6V1E1P36543 226 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 SERPINF1P36955 418 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 FABP6P51161 128 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 TAF13Q15543 124 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 ADIPOQQ15848 244 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 KRT80Q6KB66 452 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 RGS7BPQ6MZT1 257 aaPredicted RBP13.64□□□□□ -0.23
TRA2A-208ENST00000490942 TMEM154Q6P9G4 183 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 IZUMO2Q6UXV1 221 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 THAP5Q7Z6K1 395 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 SLC35F2Q8IXU6 374 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 ZNF101Q8IZC7 436 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 MUC15Q8N387 334 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 NEUROG1Q92886 237 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 ITFG2Q969R8 447 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 MRPL24Q96A35 216 aaKnown RBP13.64□□□□□ -0.23
TRA2A-208ENST00000490942 MBD6Q96DN6 1003 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 RNFT2Q96EX2 444 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 ZNF799Q96GE5 643 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 MROQ9BYG7 248 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 ANKRD60Q9BZ19 345 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 INPP5EQ9NRR6 644 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 ST6GALNAC2Q9UJ37 374 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 RAB26Q9ULW5 256 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 NBPF19A0A087WUL8 3843 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 NAV2Q8IVL1 2488 aa13.64□□□□□ -0.23
TRA2A-208ENST00000490942 RTTNQ86VV8 2226 aa13.63□□□□□ -0.23
TRA2A-208ENST00000490942 NOTCH2Q04721 2471 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms