RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 CYB561P49447 251 aa16.02■□□□□ 0.16
NPHP4-209ENST00000489180 Q6ZRG5 221 aa16.02■□□□□ 0.16
NPHP4-209ENST00000489180 HIST2H3AQ71DI3 136 aa16.02■□□□□ 0.16
NPHP4-209ENST00000489180 C1orf87Q8N0U7 546 aa16.02■□□□□ 0.16
NPHP4-209ENST00000489180 EDAQ92838 391 aa16.02■□□□□ 0.16
NPHP4-209ENST00000489180 SRRQ9GZT4 340 aa16.02■□□□□ 0.16
NPHP4-209ENST00000489180 ZCCHC4Q9H5U6 513 aa16.02■□□□□ 0.16
NPHP4-209ENST00000489180 EN2P19622 333 aaPredicted RBP16.02■□□□□ 0.16
NPHP4-209ENST00000489180 MLF2Q15773 248 aaPredicted RBP16.02■□□□□ 0.16
NPHP4-209ENST00000489180 C16orf52Q8NHV5 167 aa16.02■□□□□ 0.16
NPHP4-209ENST00000489180 DERL3Q96Q80 235 aa16.02■□□□□ 0.16
NPHP4-209ENST00000489180 DECR2Q9NUI1 292 aa16.02■□□□□ 0.16
NPHP4-209ENST00000489180 KLK11Q9UBX7 282 aa16.02■□□□□ 0.16
NPHP4-209ENST00000489180 MT-ND4LP03901 98 aa16.02■□□□□ 0.15
NPHP4-209ENST00000489180 ZNF239Q16600 458 aaKnown RBP16.02■□□□□ 0.15
NPHP4-209ENST00000489180 CTF1Q16619 201 aa16.02■□□□□ 0.15
NPHP4-209ENST00000489180 PBX4Q9BYU1 374 aa16.02■□□□□ 0.15
NPHP4-209ENST00000489180 ZNF768Q9H5H4 540 aaKnown RBP16.02■□□□□ 0.15
NPHP4-209ENST00000489180 IGHV3-15A0A0B4J1V0 119 aa16.02■□□□□ 0.15
NPHP4-209ENST00000489180 SDHBP21912 280 aa16.02■□□□□ 0.15
NPHP4-209ENST00000489180 PSMB6P28072 239 aa16.02■□□□□ 0.15
NPHP4-209ENST00000489180 LCN15Q6UWW0 184 aa16.02■□□□□ 0.15
NPHP4-209ENST00000489180 USP51Q70EK9 711 aa16.02■□□□□ 0.15
NPHP4-209ENST00000489180 SSX9Q7RTT3 188 aa16.02■□□□□ 0.15
NPHP4-209ENST00000489180 MARCH1Q8TCQ1 289 aa16.02■□□□□ 0.15
NPHP4-209ENST00000489180 APH1AQ96BI3 265 aa16.02■□□□□ 0.15
NPHP4-209ENST00000489180 LOXHD1Q8IVV2 1947 aa16.01■□□□□ 0.15
NPHP4-209ENST00000489180 TSPAN12O95859 305 aa16.01■□□□□ 0.15
NPHP4-209ENST00000489180 ZDHHC11BP0C7U3 371 aa16.01■□□□□ 0.15
NPHP4-209ENST00000489180 GABRA4P48169 554 aa16.01■□□□□ 0.15
NPHP4-209ENST00000489180 BAHD1Q8TBE0 780 aaPredicted RBP16.01■□□□□ 0.15
NPHP4-209ENST00000489180 TXN2Q99757 166 aa16.01■□□□□ 0.15
NPHP4-209ENST00000489180 TAF1P21675 1872 aa16.01■□□□□ 0.15
NPHP4-209ENST00000489180 OR2W5A6NFC9 320 aa16.01■□□□□ 0.15
NPHP4-209ENST00000489180 ZNF354AO60765 605 aaPredicted RBP16.01■□□□□ 0.15
NPHP4-209ENST00000489180 KIR2DL3P43628 341 aa16.01■□□□□ 0.15
NPHP4-209ENST00000489180 SLCO1C1Q9NYB5 712 aa16.01■□□□□ 0.15
NPHP4-209ENST00000489180 B3GAT1Q9P2W7 334 aa16.01■□□□□ 0.15
NPHP4-209ENST00000489180 OR51B4Q9Y5P0 310 aa16.01■□□□□ 0.15
NPHP4-209ENST00000489180 ASPDHA6ND91 283 aa16.01■□□□□ 0.15
NPHP4-209ENST00000489180 MAST2Q6P0Q8 1798 aa16.01■□□□□ 0.15
NPHP4-209ENST00000489180 RD3LP0DJH9 198 aa16.01■□□□□ 0.15
NPHP4-209ENST00000489180 CD27P26842 260 aa16.01■□□□□ 0.15
NPHP4-209ENST00000489180 OR2B8PP59922 312 aa16.01■□□□□ 0.15
NPHP4-209ENST00000489180 PPP2CBP62714 309 aa16.01■□□□□ 0.15
NPHP4-209ENST00000489180 PPP2CAP67775 309 aa16.01■□□□□ 0.15
NPHP4-209ENST00000489180 NKAIN1Q4KMZ8 207 aa16.01■□□□□ 0.15
NPHP4-209ENST00000489180 SLC38A9Q8NBW4 561 aa16.01■□□□□ 0.15
NPHP4-209ENST00000489180 ZNF680Q8NEM1 530 aa16.01■□□□□ 0.15
NPHP4-209ENST00000489180 FBXW5Q969U6 566 aa16.01■□□□□ 0.15
NPHP4-209ENST00000489180 CCDC74AQ96AQ1 378 aa16.01■□□□□ 0.15
NPHP4-209ENST00000489180 TVP23CQ96ET8 276 aa16.01■□□□□ 0.15
NPHP4-209ENST00000489180 ZC3HAV1LQ96H79 300 aaKnown RBP16.01■□□□□ 0.15
NPHP4-209ENST00000489180 THOC3Q96J01 351 aaKnown RBP16.01■□□□□ 0.15
NPHP4-209ENST00000489180 SLC25A32Q9H2D1 315 aa16.01■□□□□ 0.15
NPHP4-209ENST00000489180 ISYNA1Q9NPH2 558 aa16.01■□□□□ 0.15
NPHP4-209ENST00000489180 OLFM2O95897 454 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 GUCA2AQ02747 115 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 SMIM15Q7Z3B0 74 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 FN3KRPQ9HA64 309 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 SLC22A11Q9NSA0 550 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 UFSP2Q9NUQ7 469 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 PLEKHB1Q9UF11 243 aaPredicted RBP16■□□□□ 0.15
NPHP4-209ENST00000489180 KCNE3Q9Y6H6 103 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 MYO9BQ13459 2157 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 H7C1Q1 480 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 SIRPB1O00241 398 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 DVL1O14640 695 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 DVL1P1P54792 670 aaPredicted RBP16■□□□□ 0.15
NPHP4-209ENST00000489180 EMC4Q5J8M3 183 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 SPANXN5Q5MJ07 72 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 TIGD3Q6B0B8 471 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 LAT2Q9GZY6 243 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 C20orf202A1L168 122 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 AGFG1P52594 562 aaKnown RBP16■□□□□ 0.15
NPHP4-209ENST00000489180 RUNX2Q13950 521 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 TFAP2EQ6VUC0 442 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 SYS1Q8N2H4 156 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 HLA-CQ95604 372 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 PRSS37A4D1T9 235 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 TNFRSF10CO14798 259 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 CT45A6P0DMU7 189 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 CT45A5P0DMU8 189 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 CT45A7P0DMV0 189 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 CT45A8P0DMV1 189 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 CT45A9P0DMV2 189 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 CT45A2Q5DJT8 189 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 CT45A1Q5HYN5 189 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 TMEM88Q6PEY1 159 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 PLXDC2Q6UX71 529 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 FBXL6Q8N531 539 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 CT45A3Q8NHU0 189 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 UCN3Q969E3 161 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 JAM3Q9BX67 310 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 BCL2L10Q9HD36 194 aa16■□□□□ 0.15
NPHP4-209ENST00000489180 GPR171O14626 319 aa15.99■□□□□ 0.15
NPHP4-209ENST00000489180 RPL12P30050 165 aaKnown RBP15.99■□□□□ 0.15
NPHP4-209ENST00000489180 LFNGQ8NES3 379 aa15.99■□□□□ 0.15
NPHP4-209ENST00000489180 OR8U1Q8NH10 309 aa15.99■□□□□ 0.15
NPHP4-209ENST00000489180 RDH5Q92781 318 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms